Protein–RNA interactions for Protein: Q96AE4

FUBP1, Far upstream element-binding protein 1, humanhuman

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1Q96AE4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.07■□□□□ 0.16
FUBP1Q96AE4 TSPY16P-201ENST00000449843 468 ntBASIC16.07■□□□□ 0.16
FUBP1Q96AE4 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.07■□□□□ 0.16
FUBP1Q96AE4 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.07■□□□□ 0.16
FUBP1Q96AE4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 RN7SL204P-201ENST00000582831 262 ntBASIC16.07■□□□□ 0.16
FUBP1Q96AE4 TEX28P1-201ENST00000613479 1221 ntBASIC16.07■□□□□ 0.16
FUBP1Q96AE4 TEX28P2-201ENST00000617764 1221 ntBASIC16.07■□□□□ 0.16
FUBP1Q96AE4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 AC112504.1-201ENST00000623415 1841 ntBASIC16.07■□□□□ 0.16
FUBP1Q96AE4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FUBP1Q96AE4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 AC105917.1-201ENST00000506637 2539 ntBASIC16.06■□□□□ 0.16
FUBP1Q96AE4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 AC069224.1-201ENST00000566372 1715 ntBASIC16.06■□□□□ 0.16
FUBP1Q96AE4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 MIR648-201ENST00000385046 94 ntBASIC16.06■□□□□ 0.16
FUBP1Q96AE4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 AL079307.3-201ENST00000556114 283 ntBASIC16.06■□□□□ 0.16
FUBP1Q96AE4 AC009407.1-201ENST00000568958 598 ntBASIC16.06■□□□□ 0.16
FUBP1Q96AE4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FUBP1Q96AE4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FUBP1Q96AE4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.05■□□□□ 0.16
FUBP1Q96AE4 AL136982.4-201ENST00000437689 1740 ntBASIC16.05■□□□□ 0.16
FUBP1Q96AE4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FUBP1Q96AE4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FUBP1Q96AE4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FUBP1Q96AE4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.05■□□□□ 0.16
FUBP1Q96AE4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FUBP1Q96AE4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FUBP1Q96AE4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FUBP1Q96AE4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FUBP1Q96AE4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.05■□□□□ 0.16
FUBP1Q96AE4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms