Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A3Q93084 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP2A3Q93084 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ATP2A3Q93084 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP2A3Q93084 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ATP2A3Q93084 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ATP2A3Q93084 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.98■□□□□ 0.31
ATP2A3Q93084 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.98■□□□□ 0.31
ATP2A3Q93084 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.98■□□□□ 0.31
ATP2A3Q93084 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.98■□□□□ 0.31
ATP2A3Q93084 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP2A3Q93084 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ATP2A3Q93084 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
ATP2A3Q93084 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP2A3Q93084 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.98■□□□□ 0.31
ATP2A3Q93084 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.98■□□□□ 0.31
ATP2A3Q93084 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A3Q93084 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 ALOX12P2-203ENST00000570921 1945 ntBASIC16.97■□□□□ 0.31
ATP2A3Q93084 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 AC022144.1-201ENST00000602255 1580 ntBASIC16.97■□□□□ 0.31
ATP2A3Q93084 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP2A3Q93084 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ATP2A3Q93084 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 AC092364.2-201ENST00000596710 2692 ntBASIC16.96■□□□□ 0.31
ATP2A3Q93084 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 PCDHA1-201ENST00000378133 2726 ntBASIC16.96■□□□□ 0.31
ATP2A3Q93084 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.96■□□□□ 0.31
ATP2A3Q93084 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 TSSK5P-201ENST00000423978 907 ntBASIC16.96■□□□□ 0.31
ATP2A3Q93084 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A3Q93084 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.96■□□□□ 0.31
ATP2A3Q93084 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms