Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 MT3-203ENST00000565838 421 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 CDK4P1-201ENST00000454213 828 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC010632.2-201ENST00000588369 1224 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 PPIA-210ENST00000620047 827 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC132938.4-201ENST00000623835 848 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 REXO1L11P-201ENST00000620964 1927 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AP001184.1-201ENST00000637936 376 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 PHKG1P2-201ENST00000457537 863 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 HNRNPA1P7-201ENST00000521273 963 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AP001582.1-201ENST00000525856 295 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC084781.1-201ENST00000613737 656 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AL008638.4-201ENST00000624792 1315 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 MIR1301-201ENST00000408518 82 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 POLR2LP1-206ENST00000444785 187 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 AC009779.1-201ENST00000551138 283 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 NEK4P3-201ENST00000604859 544 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 TOP3BP1-201ENST00000420768 1380 ntBASIC6.29□□□□□ -1.4
SYNE2Q8WXH0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms