Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
STAG1Q8WVM7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 AL162727.3-201ENST00000635661 2787 ntBASIC18.86■□□□□ 0.61
STAG1Q8WVM7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 AC097359.3-201ENST00000603982 1210 ntBASIC18.86■□□□□ 0.61
STAG1Q8WVM7 AC008738.7-201ENST00000609744 511 ntBASIC18.86■□□□□ 0.61
STAG1Q8WVM7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 AL365203.3-201ENST00000609742 2057 ntBASIC18.86■□□□□ 0.61
STAG1Q8WVM7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
STAG1Q8WVM7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 AC136604.1-201ENST00000418535 575 ntBASIC18.85■□□□□ 0.61
STAG1Q8WVM7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 AC044860.1-202ENST00000559481 777 ntBASIC18.85■□□□□ 0.61
STAG1Q8WVM7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 Z97205.2-201ENST00000564697 1639 ntBASIC18.85■□□□□ 0.61
STAG1Q8WVM7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.85■□□□□ 0.61
STAG1Q8WVM7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 AC018695.7-201ENST00000624587 2492 ntBASIC18.84■□□□□ 0.61
STAG1Q8WVM7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
STAG1Q8WVM7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms