Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 AC093724.1-201ENST00000448659 1027 ntBASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 AC104640.1-201ENST00000562617 2109 ntBASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 AC140113.2-201ENST00000604370 208 ntBASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK2A3Q8NEV1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 SLC25A1P1-201ENST00000528351 927 ntBASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 AL365330.1-201ENST00000607459 531 ntBASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 AC016027.1-202ENST00000607927 1699 ntBASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 AC097376.2-205ENST00000610159 5334 ntBASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK2A3Q8NEV1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CSNK2A3Q8NEV1 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
CSNK2A3Q8NEV1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.08□□□□□ -0.15
CSNK2A3Q8NEV1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CSNK2A3Q8NEV1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.08□□□□□ -0.15
CSNK2A3Q8NEV1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSNK2A3Q8NEV1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CSNK2A3Q8NEV1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK2A3Q8NEV1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms