Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AL606495.2-201ENST00000605867 535 ntBASIC19.65■□□□□ 0.74
RTL9Q8NET4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.64■□□□□ 0.74
RTL9Q8NET4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RTL9Q8NET4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.64■□□□□ 0.74
RTL9Q8NET4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RTL9Q8NET4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTL9Q8NET4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTL9Q8NET4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTL9Q8NET4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTL9Q8NET4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 AC124283.3-201ENST00000570869 594 ntBASIC19.64■□□□□ 0.73
RTL9Q8NET4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 COX11-210ENST00000639671 696 ntBASIC19.64■□□□□ 0.73
RTL9Q8NET4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTL9Q8NET4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTL9Q8NET4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.64■□□□□ 0.73
RTL9Q8NET4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTL9Q8NET4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTL9Q8NET4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 AL162726.2-201ENST00000438986 1017 ntBASIC19.63■□□□□ 0.73
RTL9Q8NET4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 AC010319.3-201ENST00000597028 470 ntBASIC19.63■□□□□ 0.73
RTL9Q8NET4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.63■□□□□ 0.73
RTL9Q8NET4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL9Q8NET4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 MTHFR-217ENST00000641820 1569 ntBASIC19.62■□□□□ 0.73
RTL9Q8NET4 REXO1L6P-201ENST00000603433 1515 ntBASIC19.62■□□□□ 0.73
RTL9Q8NET4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 KRT223P-202ENST00000449164 1292 ntBASIC19.62■□□□□ 0.73
RTL9Q8NET4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL9Q8NET4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
RTL9Q8NET4 AC011477.6-201ENST00000604980 1927 ntBASIC19.62■□□□□ 0.73
RTL9Q8NET4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms