Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00311Q8N616 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00311Q8N616 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00311Q8N616 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LINC00311Q8N616 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00311Q8N616 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC00311Q8N616 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00311Q8N616 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
LINC00311Q8N616 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LINC00311Q8N616 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00311Q8N616 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00311Q8N616 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00311Q8N616 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00311Q8N616 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00311Q8N616 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.01□□□□□ -0.33
LINC00311Q8N616 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00311Q8N616 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13□□□□□ -0.33
LINC00311Q8N616 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13□□□□□ -0.33
LINC00311Q8N616 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13□□□□□ -0.33
LINC00311Q8N616 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13□□□□□ -0.33
LINC00311Q8N616 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13□□□□□ -0.33
LINC00311Q8N616 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13□□□□□ -0.33
LINC00311Q8N616 GRAMD4P3-201ENST00000621665 1669 ntBASIC13□□□□□ -0.33
LINC00311Q8N616 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13□□□□□ -0.33
LINC00311Q8N616 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LINC00311Q8N616 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 KRT8P12-202ENST00000472924 1397 ntBASIC13□□□□□ -0.33
LINC00311Q8N616 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
LINC00311Q8N616 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13□□□□□ -0.33
LINC00311Q8N616 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13□□□□□ -0.33
LINC00311Q8N616 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13□□□□□ -0.33
LINC00311Q8N616 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13□□□□□ -0.33
LINC00311Q8N616 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
LINC00311Q8N616 MIR4453-201ENST00000584019 89 ntBASIC13□□□□□ -0.33
LINC00311Q8N616 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13□□□□□ -0.33
LINC00311Q8N616 AL596442.2-201ENST00000610240 980 ntBASIC13□□□□□ -0.33
LINC00311Q8N616 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13□□□□□ -0.33
LINC00311Q8N616 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LINC00311Q8N616 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00311Q8N616 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 AC136604.1-201ENST00000418535 575 ntBASIC12.99□□□□□ -0.33
LINC00311Q8N616 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 MIR4313-201ENST00000580760 101 ntBASIC12.99□□□□□ -0.33
LINC00311Q8N616 AC015911.4-201ENST00000588022 1070 ntBASIC12.99□□□□□ -0.33
LINC00311Q8N616 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00311Q8N616 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00311Q8N616 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms