Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC241585.1-201ENST00000433527 519 ntBASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 RN7SL828P-201ENST00000607615 303 ntBASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 SPDYE12P-201ENST00000618416 771 ntBASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 AJ011932.1-201ENST00000621707 465 ntBASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 AC103702.1-201ENST00000548801 2630 ntBASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRIM48Q8IWZ4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM48Q8IWZ4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM48Q8IWZ4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.83■□□□□ 0.13
TRIM48Q8IWZ4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM48Q8IWZ4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM48Q8IWZ4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.83■□□□□ 0.13
TRIM48Q8IWZ4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.83■□□□□ 0.13
TRIM48Q8IWZ4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.83■□□□□ 0.13
TRIM48Q8IWZ4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM48Q8IWZ4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM48Q8IWZ4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.83■□□□□ 0.13
TRIM48Q8IWZ4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TRIM48Q8IWZ4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.83■□□□□ 0.13
TRIM48Q8IWZ4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 PCDHA14-201ENST00000506751 2298 ntBASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM48Q8IWZ4 MIR600HG-201ENST00000449175 5984 ntBASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 AC092580.3-201ENST00000430932 139 ntBASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 HLA-V-204ENST00000476601 1289 ntBASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms