Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.05■□□□□ 0.16
APLFQ8IW19 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
APLFQ8IW19 AC005252.3-201ENST00000623855 2258 ntBASIC16.05■□□□□ 0.16
APLFQ8IW19 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.05■□□□□ 0.16
APLFQ8IW19 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.05■□□□□ 0.16
APLFQ8IW19 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.05■□□□□ 0.16
APLFQ8IW19 ACTG1P4-201ENST00000425123 1122 ntBASIC16.05■□□□□ 0.16
APLFQ8IW19 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.05■□□□□ 0.16
APLFQ8IW19 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.05■□□□□ 0.16
APLFQ8IW19 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.05■□□□□ 0.16
APLFQ8IW19 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.05■□□□□ 0.16
APLFQ8IW19 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
APLFQ8IW19 AC092364.2-202ENST00000597012 1073 ntBASIC16.05■□□□□ 0.16
APLFQ8IW19 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
APLFQ8IW19 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
APLFQ8IW19 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
APLFQ8IW19 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.05■□□□□ 0.16
APLFQ8IW19 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
APLFQ8IW19 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.05■□□□□ 0.16
APLFQ8IW19 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.04■□□□□ 0.16
APLFQ8IW19 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 AC092053.1-201ENST00000605787 1936 ntBASIC16.04■□□□□ 0.16
APLFQ8IW19 HLA-A-202ENST00000376806 1854 ntBASIC16.04■□□□□ 0.16
APLFQ8IW19 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 MIR770-201ENST00000390219 98 ntBASIC16.04■□□□□ 0.16
APLFQ8IW19 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.04■□□□□ 0.16
APLFQ8IW19 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.04■□□□□ 0.16
APLFQ8IW19 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.04■□□□□ 0.16
APLFQ8IW19 TSEN15P1-201ENST00000423257 515 ntBASIC16.04■□□□□ 0.16
APLFQ8IW19 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.04■□□□□ 0.16
APLFQ8IW19 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.04■□□□□ 0.16
APLFQ8IW19 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.04■□□□□ 0.16
APLFQ8IW19 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
APLFQ8IW19 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.04■□□□□ 0.16
APLFQ8IW19 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.04■□□□□ 0.16
APLFQ8IW19 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.04■□□□□ 0.16
APLFQ8IW19 AC004835.2-201ENST00000603762 682 ntBASIC16.04■□□□□ 0.16
APLFQ8IW19 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.04■□□□□ 0.16
APLFQ8IW19 AC091812.2-201ENST00000619081 385 ntBASIC16.04■□□□□ 0.16
APLFQ8IW19 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
APLFQ8IW19 AC007326.2-201ENST00000624224 7579 ntBASIC16.04■□□□□ 0.16
APLFQ8IW19 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.04■□□□□ 0.16
APLFQ8IW19 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.04■□□□□ 0.16
APLFQ8IW19 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.04■□□□□ 0.16
APLFQ8IW19 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
APLFQ8IW19 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APLFQ8IW19 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.04■□□□□ 0.16
APLFQ8IW19 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.04■□□□□ 0.16
APLFQ8IW19 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
APLFQ8IW19 PPT1-215ENST00000641471 2368 ntBASIC16.04■□□□□ 0.16
APLFQ8IW19 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
APLFQ8IW19 LINC01101-201ENST00000622953 1884 ntBASIC16.03■□□□□ 0.16
APLFQ8IW19 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.03■□□□□ 0.16
APLFQ8IW19 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
APLFQ8IW19 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.03■□□□□ 0.16
APLFQ8IW19 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.03■□□□□ 0.16
APLFQ8IW19 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms