Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 AC025678.2-201ENST00000562061 970 ntBASIC15.13■□□□□ 0.01
CCDC71Q8IV32 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 AC129492.6-201ENST00000611383 1305 ntBASIC15.13■□□□□ 0.01
CCDC71Q8IV32 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CCDC71Q8IV32 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.12■□□□□ 0.01
CCDC71Q8IV32 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 AC023157.3-201ENST00000619086 2088 ntBASIC15.12■□□□□ 0.01
CCDC71Q8IV32 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 AC002056.1-201ENST00000395613 760 ntBASIC15.12■□□□□ 0.01
CCDC71Q8IV32 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 AC023141.5-201ENST00000458585 616 ntBASIC15.12■□□□□ 0.01
CCDC71Q8IV32 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 HLA-J-203ENST00000494367 1087 ntBASIC15.12■□□□□ 0.01
CCDC71Q8IV32 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 LINC00628-201ENST00000628516 1289 ntBASIC15.12■□□□□ 0.01
CCDC71Q8IV32 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 PCGF3-213ENST00000620529 1899 ntBASIC15.12■□□□□ 0.01
CCDC71Q8IV32 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.12■□□□□ 0.01
CCDC71Q8IV32 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC71Q8IV32 SSR4P1-203ENST00000599569 2260 ntBASIC15.12■□□□□ 0.01
CCDC71Q8IV32 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 GPAA1P2-202ENST00000606848 1787 ntBASIC15.11■□□□□ 0.01
CCDC71Q8IV32 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.11■□□□□ 0.01
CCDC71Q8IV32 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 AL671277.1-201ENST00000429656 993 ntBASIC15.11■□□□□ 0.01
CCDC71Q8IV32 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms