Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 AC097359.3-201ENST00000603982 1210 ntBASIC19.87■□□□□ 0.77
COL23A1Q86Y22 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 AP001505.2-201ENST00000616815 443 ntBASIC19.87■□□□□ 0.77
COL23A1Q86Y22 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
COL23A1Q86Y22 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.86■□□□□ 0.77
COL23A1Q86Y22 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.86■□□□□ 0.77
COL23A1Q86Y22 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.85■□□□□ 0.77
COL23A1Q86Y22 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 CNN2P10-201ENST00000443067 918 ntBASIC19.85■□□□□ 0.77
COL23A1Q86Y22 AC044849.1-201ENST00000519737 1188 ntBASIC19.85■□□□□ 0.77
COL23A1Q86Y22 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 ECM1P1-201ENST00000604092 1279 ntBASIC19.85■□□□□ 0.77
COL23A1Q86Y22 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL23A1Q86Y22 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 GAPDHP40-201ENST00000505218 1006 ntBASIC19.84■□□□□ 0.77
COL23A1Q86Y22 COX5BP1-201ENST00000507622 393 ntBASIC19.84■□□□□ 0.77
COL23A1Q86Y22 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 AL450472.2-201ENST00000603663 1156 ntBASIC19.84■□□□□ 0.77
COL23A1Q86Y22 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL23A1Q86Y22 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 REXO1L1P-202ENST00000608646 1974 ntBASIC19.83■□□□□ 0.77
COL23A1Q86Y22 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 AL023775.1-201ENST00000454907 1746 ntBASIC19.83■□□□□ 0.77
COL23A1Q86Y22 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms