Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRTM1Q86UE6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 AKR1C7P-201ENST00000305623 895 ntBASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 AP002469.2-201ENST00000531724 424 ntBASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 AL121772.3-201ENST00000610840 674 ntBASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRRTM1Q86UE6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 AC092127.1-201ENST00000567093 3455 ntBASIC14□□□□□ -0.17
LRRTM1Q86UE6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 MRPL20P1-201ENST00000400819 433 ntBASIC14□□□□□ -0.17
LRRTM1Q86UE6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 AL365330.1-201ENST00000607459 531 ntBASIC14□□□□□ -0.17
LRRTM1Q86UE6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 AL009178.2-201ENST00000597278 2719 ntBASIC14□□□□□ -0.17
LRRTM1Q86UE6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 POR-201ENST00000394893 2532 ntTSL 5 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14□□□□□ -0.17
LRRTM1Q86UE6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRTM1Q86UE6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRTM1Q86UE6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms