Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 VN2R19P-201ENST00000442399 1052 ntBASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 AC093724.1-201ENST00000448659 1027 ntBASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 AP002469.2-201ENST00000531724 424 ntBASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 AL773604.1-201ENST00000617417 272 ntBASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.74□□□□□ -0.05
SMARCD3Q6STE5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 HAUS4P1-201ENST00000406739 1145 ntBASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 CRYGEP-201ENST00000412192 528 ntBASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMARCD3Q6STE5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 IGLL3P-201ENST00000412472 434 ntBASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 AC098831.1-202ENST00000438821 336 ntBASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 AC079781.3-201ENST00000449110 356 ntBASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 KRT18P34-201ENST00000488218 1270 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms