Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 PMS2P1-201ENST00000431037 1228 ntBASIC14.14□□□□□ -0.15
C11orf88Q6PI97 AC122714.2-201ENST00000502787 707 ntBASIC14.14□□□□□ -0.15
C11orf88Q6PI97 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 AC011467.2-201ENST00000598425 242 ntBASIC14.14□□□□□ -0.15
C11orf88Q6PI97 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 AL355877.3-201ENST00000622820 899 ntBASIC14.14□□□□□ -0.15
C11orf88Q6PI97 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 PEG13-201ENST00000631594 5667 ntBASIC14.14□□□□□ -0.15
C11orf88Q6PI97 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.14□□□□□ -0.15
C11orf88Q6PI97 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
C11orf88Q6PI97 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 AP005117.1-202ENST00000581724 1908 ntBASIC14.13□□□□□ -0.15
C11orf88Q6PI97 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 MRPL3P1-201ENST00000400109 1033 ntBASIC14.13□□□□□ -0.15
C11orf88Q6PI97 AC007967.3-201ENST00000434308 558 ntBASIC14.13□□□□□ -0.15
C11orf88Q6PI97 AC132008.2-207ENST00000454517 770 ntBASIC14.13□□□□□ -0.15
C11orf88Q6PI97 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 AC010460.3-201ENST00000511359 1579 ntBASIC14.13□□□□□ -0.15
C11orf88Q6PI97 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf88Q6PI97 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms