Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF20Q5VTR2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 AC005237.2-201ENST00000434368 219 ntBASIC19.22■□□□□ 0.67
RNF20Q5VTR2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 AL513210.1-201ENST00000629608 234 ntBASIC19.22■□□□□ 0.67
RNF20Q5VTR2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF20Q5VTR2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF20Q5VTR2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
RNF20Q5VTR2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 AP3S2-216ENST00000617003 1561 ntBASIC19.2■□□□□ 0.66
RNF20Q5VTR2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 AC004987.2-201ENST00000395959 1148 ntBASIC19.2■□□□□ 0.66
RNF20Q5VTR2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms