Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 DUSP5P1-201ENST00000441325 1139 ntBASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 KRT18P21-201ENST00000515767 1272 ntBASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 MIR3909-201ENST00000579518 119 ntBASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 MIR4515-201ENST00000584082 81 ntBASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 AC008667.4-201ENST00000607370 168 ntBASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 AL365330.1-201ENST00000607459 531 ntBASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 AC107918.4-202ENST00000641623 219 ntBASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 AC106881.1-201ENST00000605849 3329 ntBASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 GOLGA8DP-202ENST00000341390 2184 ntBASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00242Q5T6M2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 AC092127.1-201ENST00000567093 3455 ntBASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 PMS2P4-201ENST00000412466 1052 ntBASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 KRT18P27-201ENST00000427733 1299 ntBASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 AC093724.1-201ENST00000448659 1027 ntBASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 AC136632.2-201ENST00000512891 861 ntBASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 AC021087.4-201ENST00000563761 564 ntBASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 AL031055.1-201ENST00000606362 631 ntBASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 OR2I1P-210ENST00000642037 4691 ntBASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00242Q5T6M2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.02□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms