Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 AC098850.1-201ENST00000419919 790 ntBASIC16.98■□□□□ 0.31
VARS2Q5ST30 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 ELK1P1-201ENST00000485699 580 ntBASIC16.98■□□□□ 0.31
VARS2Q5ST30 AC104629.1-201ENST00000494226 508 ntBASIC16.98■□□□□ 0.31
VARS2Q5ST30 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 RRP7BP-205ENST00000566851 833 ntBASIC16.98■□□□□ 0.31
VARS2Q5ST30 CTBP2P3-201ENST00000585629 1255 ntBASIC16.98■□□□□ 0.31
VARS2Q5ST30 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 AC134407.2-201ENST00000625089 1978 ntBASIC16.98■□□□□ 0.31
VARS2Q5ST30 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 AP001282.1-201ENST00000531301 1499 ntBASIC16.98■□□□□ 0.31
VARS2Q5ST30 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.98■□□□□ 0.31
VARS2Q5ST30 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VARS2Q5ST30 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 RARRES2P5-201ENST00000564013 466 ntBASIC16.97■□□□□ 0.31
VARS2Q5ST30 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VARS2Q5ST30 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VARS2Q5ST30 AC006449.6-201ENST00000612330 2296 ntBASIC16.96■□□□□ 0.31
VARS2Q5ST30 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARS2Q5ST30 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VARS2Q5ST30 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VARS2Q5ST30 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VARS2Q5ST30 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARS2Q5ST30 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VARS2Q5ST30 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARS2Q5ST30 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARS2Q5ST30 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
VARS2Q5ST30 AL512384.1-201ENST00000406683 331 ntBASIC16.96■□□□□ 0.31
VARS2Q5ST30 AC074338.1-201ENST00000416825 156 ntBASIC16.96■□□□□ 0.31
VARS2Q5ST30 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.96■□□□□ 0.31
VARS2Q5ST30 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
VARS2Q5ST30 RPL13P2-201ENST00000440687 659 ntBASIC16.96■□□□□ 0.31
VARS2Q5ST30 TARDBPP1-201ENST00000442013 1203 ntBASIC16.96■□□□□ 0.31
VARS2Q5ST30 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARS2Q5ST30 GIMAP3P-201ENST00000495150 836 ntBASIC16.96■□□□□ 0.31
VARS2Q5ST30 AC011495.1-201ENST00000498085 584 ntBASIC16.96■□□□□ 0.31
VARS2Q5ST30 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VARS2Q5ST30 HILS1-202ENST00000545329 423 ntBASIC16.96■□□□□ 0.31
VARS2Q5ST30 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.96■□□□□ 0.31
VARS2Q5ST30 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VARS2Q5ST30 AC132938.2-201ENST00000579188 680 ntBASIC16.96■□□□□ 0.31
VARS2Q5ST30 AC005972.3-201ENST00000606304 481 ntBASIC16.96■□□□□ 0.31
VARS2Q5ST30 AC084346.2-201ENST00000607097 949 ntBASIC16.96■□□□□ 0.31
VARS2Q5ST30 AL591163.1-201ENST00000641757 987 ntBASIC16.96■□□□□ 0.31
VARS2Q5ST30 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARS2Q5ST30 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms