Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 AC011506.1-201ENST00000474329 610 ntBASIC8.17□□□□□ -1.1
LINC01554Q52M75 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 IRX5-204ENST00000560154 879 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 AC026271.3-201ENST00000571884 352 ntBASIC8.17□□□□□ -1.1
LINC01554Q52M75 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 RN7SL471P-201ENST00000580476 299 ntBASIC8.17□□□□□ -1.1
LINC01554Q52M75 AF186192.3-201ENST00000583427 947 ntBASIC8.17□□□□□ -1.1
LINC01554Q52M75 AC008622.2-201ENST00000617006 1229 ntBASIC8.17□□□□□ -1.1
LINC01554Q52M75 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 KRT8P50-201ENST00000562022 1438 ntBASIC8.17□□□□□ -1.1
LINC01554Q52M75 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 FSCN1P1-201ENST00000568912 1481 ntBASIC8.17□□□□□ -1.1
LINC01554Q52M75 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 AC102953.2-201ENST00000609755 3026 ntBASIC8.17□□□□□ -1.1
LINC01554Q52M75 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01554Q52M75 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01554Q52M75 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 AC008040.2-201ENST00000461049 708 ntBASIC8.16□□□□□ -1.1
LINC01554Q52M75 B3GAT3P1-201ENST00000471720 806 ntBASIC8.16□□□□□ -1.1
LINC01554Q52M75 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LINC01554Q52M75 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 AC097488.1-201ENST00000507834 756 ntBASIC8.16□□□□□ -1.1
LINC01554Q52M75 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC8.16□□□□□ -1.1
LINC01554Q52M75 MBLAC2-202ENST00000514906 1936 ntBASIC8.16□□□□□ -1.1
LINC01554Q52M75 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms