Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC6LQ2NKX8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 SPDYE21P-201ENST00000413323 827 ntBASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 YBX1P2-201ENST00000489612 999 ntBASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 AC139887.4-201ENST00000607877 719 ntBASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC6LQ2NKX8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC6LQ2NKX8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC6LQ2NKX8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.08■□□□□ 0.33
ERCC6LQ2NKX8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC6LQ2NKX8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.08■□□□□ 0.33
ERCC6LQ2NKX8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.08■□□□□ 0.33
ERCC6LQ2NKX8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC6LQ2NKX8 SLC22A20-204ENST00000530038 1673 ntBASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 AC073508.3-201ENST00000619697 1419 ntBASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 KRT8P44-201ENST00000441609 1350 ntBASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 AC011558.1-201ENST00000623459 338 ntBASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.08■□□□□ 0.32
ERCC6LQ2NKX8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ERCC6LQ2NKX8 AC148477.4-201ENST00000613430 1793 ntBASIC17.07■□□□□ 0.32
ERCC6LQ2NKX8 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms