Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSRP1Q08945 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.65■□□□□ 0.58
SSRP1Q08945 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.65■□□□□ 0.58
SSRP1Q08945 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.65■□□□□ 0.58
SSRP1Q08945 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSRP1Q08945 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSRP1Q08945 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.65■□□□□ 0.58
SSRP1Q08945 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSRP1Q08945 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SSRP1Q08945 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSRP1Q08945 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.65■□□□□ 0.58
SSRP1Q08945 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSRP1Q08945 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.65■□□□□ 0.58
SSRP1Q08945 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.65■□□□□ 0.58
SSRP1Q08945 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.65■□□□□ 0.58
SSRP1Q08945 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.65■□□□□ 0.58
SSRP1Q08945 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.65■□□□□ 0.58
SSRP1Q08945 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.65■□□□□ 0.58
SSRP1Q08945 AP001059.3-201ENST00000619053 235 ntBASIC18.65■□□□□ 0.58
SSRP1Q08945 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.65■□□□□ 0.58
SSRP1Q08945 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSRP1Q08945 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.65■□□□□ 0.58
SSRP1Q08945 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SSRP1Q08945 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.65■□□□□ 0.58
SSRP1Q08945 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.65■□□□□ 0.58
SSRP1Q08945 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SSRP1Q08945 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSRP1Q08945 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SSRP1Q08945 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSRP1Q08945 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.65■□□□□ 0.58
SSRP1Q08945 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SSRP1Q08945 AC132872.4-202ENST00000622924 2756 ntBASIC18.64■□□□□ 0.58
SSRP1Q08945 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.64■□□□□ 0.58
SSRP1Q08945 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
SSRP1Q08945 CYP4F24P-201ENST00000586049 1580 ntBASIC18.64■□□□□ 0.58
SSRP1Q08945 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSRP1Q08945 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSRP1Q08945 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSRP1Q08945 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.64■□□□□ 0.57
SSRP1Q08945 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSRP1Q08945 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSRP1Q08945 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.64■□□□□ 0.57
SSRP1Q08945 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.64■□□□□ 0.57
SSRP1Q08945 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.64■□□□□ 0.57
SSRP1Q08945 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.64■□□□□ 0.57
SSRP1Q08945 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.64■□□□□ 0.57
SSRP1Q08945 AC105021.1-202ENST00000570572 669 ntBASIC18.64■□□□□ 0.57
SSRP1Q08945 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSRP1Q08945 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.64■□□□□ 0.57
SSRP1Q08945 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSRP1Q08945 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSRP1Q08945 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSRP1Q08945 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSRP1Q08945 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSRP1Q08945 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSRP1Q08945 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SSRP1Q08945 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.64■□□□□ 0.57
SSRP1Q08945 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSRP1Q08945 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSRP1Q08945 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.63■□□□□ 0.57
SSRP1Q08945 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSRP1Q08945 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSRP1Q08945 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSRP1Q08945 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSRP1Q08945 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSRP1Q08945 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.63■□□□□ 0.57
SSRP1Q08945 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.63■□□□□ 0.57
SSRP1Q08945 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.63■□□□□ 0.57
SSRP1Q08945 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 MIR4453-201ENST00000584019 89 ntBASIC18.63■□□□□ 0.57
SSRP1Q08945 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.63■□□□□ 0.57
SSRP1Q08945 LINC00628-201ENST00000628516 1289 ntBASIC18.63■□□□□ 0.57
SSRP1Q08945 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.63■□□□□ 0.57
SSRP1Q08945 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSRP1Q08945 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.63■□□□□ 0.57
SSRP1Q08945 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SSRP1Q08945 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.63■□□□□ 0.57
SSRP1Q08945 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSRP1Q08945 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SSRP1Q08945 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSRP1Q08945 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSRP1Q08945 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSRP1Q08945 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SSRP1Q08945 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.62■□□□□ 0.57
SSRP1Q08945 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSRP1Q08945 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms