Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AC243562.2-201ENST00000561247 970 ntBASIC14.36□□□□□ -0.11
EFNB1P98172 MIR4751-201ENST00000578027 74 ntBASIC14.36□□□□□ -0.11
EFNB1P98172 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.36□□□□□ -0.11
EFNB1P98172 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.36□□□□□ -0.11
EFNB1P98172 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
EFNB1P98172 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNB1P98172 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.36□□□□□ -0.11
EFNB1P98172 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNB1P98172 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNB1P98172 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
EFNB1P98172 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
EFNB1P98172 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB1P98172 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
EFNB1P98172 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.35□□□□□ -0.11
EFNB1P98172 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNB1P98172 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNB1P98172 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNB1P98172 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EFNB1P98172 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 AC232323.1-201ENST00000540724 2099 ntBASIC14.35□□□□□ -0.11
EFNB1P98172 REXO1L5P-201ENST00000622260 2098 ntBASIC14.35□□□□□ -0.11
EFNB1P98172 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.35□□□□□ -0.11
EFNB1P98172 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
EFNB1P98172 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNB1P98172 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
EFNB1P98172 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
EFNB1P98172 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
EFNB1P98172 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 AC009947.1-201ENST00000444350 727 ntBASIC14.35□□□□□ -0.11
EFNB1P98172 AF186996.4-201ENST00000467186 377 ntBASIC14.35□□□□□ -0.11
EFNB1P98172 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.35□□□□□ -0.11
EFNB1P98172 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.35□□□□□ -0.11
EFNB1P98172 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
EFNB1P98172 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNB1P98172 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNB1P98172 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.35□□□□□ -0.11
EFNB1P98172 AC073389.1-201ENST00000595595 795 ntBASIC14.35□□□□□ -0.11
EFNB1P98172 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.35□□□□□ -0.11
EFNB1P98172 AL121912.1-201ENST00000603683 238 ntBASIC14.35□□□□□ -0.11
EFNB1P98172 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 AC010507.1-201ENST00000633895 436 ntBASIC14.35□□□□□ -0.11
EFNB1P98172 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 SNX18-202ENST00000343017 3140 ntBASIC14.35□□□□□ -0.11
EFNB1P98172 LINC00552-201ENST00000625151 2579 ntBASIC14.35□□□□□ -0.11
EFNB1P98172 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNB1P98172 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 FGD5P1-202ENST00000614866 2498 ntBASIC14.35□□□□□ -0.11
EFNB1P98172 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.35□□□□□ -0.11
EFNB1P98172 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
EFNB1P98172 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
EFNB1P98172 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
EFNB1P98172 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
EFNB1P98172 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB1P98172 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
EFNB1P98172 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB1P98172 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
EFNB1P98172 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNB1P98172 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB1P98172 AP002414.2-201ENST00000591780 3365 ntBASIC14.34□□□□□ -0.11
EFNB1P98172 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB1P98172 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNB1P98172 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB1P98172 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB1P98172 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB1P98172 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB1P98172 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms