Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.88■□□□□ 0.13
SRP54P61011 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.88■□□□□ 0.13
SRP54P61011 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.88■□□□□ 0.13
SRP54P61011 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.88■□□□□ 0.13
SRP54P61011 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SRP54P61011 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
SRP54P61011 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SRP54P61011 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 AC044860.1-202ENST00000559481 777 ntBASIC15.88■□□□□ 0.13
SRP54P61011 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.88■□□□□ 0.13
SRP54P61011 AC239800.4-201ENST00000603712 296 ntBASIC15.88■□□□□ 0.13
SRP54P61011 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 MIR6069-201ENST00000620069 79 ntBASIC15.88■□□□□ 0.13
SRP54P61011 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.88■□□□□ 0.13
SRP54P61011 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.88■□□□□ 0.13
SRP54P61011 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.88■□□□□ 0.13
SRP54P61011 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
SRP54P61011 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SRP54P61011 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
SRP54P61011 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SRP54P61011 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.88■□□□□ 0.13
SRP54P61011 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.88■□□□□ 0.13
SRP54P61011 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SRP54P61011 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.88■□□□□ 0.13
SRP54P61011 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRP54P61011 AL592424.1-201ENST00000563624 1536 ntBASIC15.88■□□□□ 0.13
SRP54P61011 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.88■□□□□ 0.13
SRP54P61011 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SRP54P61011 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SRP54P61011 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.87■□□□□ 0.13
SRP54P61011 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.87■□□□□ 0.13
SRP54P61011 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.87■□□□□ 0.13
SRP54P61011 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SRP54P61011 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.87■□□□□ 0.13
SRP54P61011 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.87■□□□□ 0.13
SRP54P61011 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.87■□□□□ 0.13
SRP54P61011 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.87■□□□□ 0.13
SRP54P61011 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.87■□□□□ 0.13
SRP54P61011 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.87■□□□□ 0.13
SRP54P61011 AL662799.1-202ENST00000614205 422 ntBASIC15.87■□□□□ 0.13
SRP54P61011 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.87■□□□□ 0.13
SRP54P61011 AL136982.4-201ENST00000437689 1740 ntBASIC15.87■□□□□ 0.13
SRP54P61011 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.87■□□□□ 0.13
SRP54P61011 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.87■□□□□ 0.13
SRP54P61011 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 FLJ38576-201ENST00000623820 2459 ntBASIC15.87■□□□□ 0.13
SRP54P61011 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SRP54P61011 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRP54P61011 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.86■□□□□ 0.13
SRP54P61011 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SRP54P61011 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.86■□□□□ 0.13
SRP54P61011 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 AC092171.3-201ENST00000610122 2651 ntBASIC15.86■□□□□ 0.13
SRP54P61011 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.86■□□□□ 0.13
SRP54P61011 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRP54P61011 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms