Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH12P55289 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH12P55289 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.05■□□□□ 0
CDH12P55289 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH12P55289 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH12P55289 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.05■□□□□ 0
CDH12P55289 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.05■□□□□ 0
CDH12P55289 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH12P55289 CRYGEP-201ENST00000412192 528 ntBASIC15.05■□□□□ -0
CDH12P55289 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDH12P55289 RNA5SP415-201ENST00000517246 115 ntBASIC15.05■□□□□ -0
CDH12P55289 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CDH12P55289 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
CDH12P55289 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.05■□□□□ -0
CDH12P55289 AP001005.1-201ENST00000571755 1248 ntBASIC15.05■□□□□ -0
CDH12P55289 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CDH12P55289 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.05■□□□□ -0
CDH12P55289 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.05■□□□□ -0
CDH12P55289 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH12P55289 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.05■□□□□ -0
CDH12P55289 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH12P55289 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH12P55289 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH12P55289 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.05■□□□□ -0
CDH12P55289 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH12P55289 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.05■□□□□ -0
CDH12P55289 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH12P55289 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDH12P55289 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH12P55289 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
CDH12P55289 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH12P55289 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH12P55289 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.05■□□□□ -0
CDH12P55289 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH12P55289 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CDH12P55289 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.05■□□□□ -0
CDH12P55289 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH12P55289 LINC02228-204ENST00000642115 2962 ntBASIC15.05■□□□□ -0
CDH12P55289 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.04■□□□□ -0
CDH12P55289 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
CDH12P55289 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.04■□□□□ -0
CDH12P55289 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.04■□□□□ -0
CDH12P55289 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.04■□□□□ -0
CDH12P55289 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
CDH12P55289 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.04■□□□□ -0
CDH12P55289 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDH12P55289 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 PMS2P4-201ENST00000412466 1052 ntBASIC15.04■□□□□ -0
CDH12P55289 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.04■□□□□ -0
CDH12P55289 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
CDH12P55289 IGHV3-22-201ENST00000520721 359 ntBASIC15.04■□□□□ -0
CDH12P55289 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.04■□□□□ -0
CDH12P55289 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDH12P55289 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDH12P55289 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.04■□□□□ -0
CDH12P55289 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CDH12P55289 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDH12P55289 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.04■□□□□ -0
CDH12P55289 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH12P55289 AC020658.6-201ENST00000623564 1870 ntBASIC15.03■□□□□ -0
CDH12P55289 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.03■□□□□ -0
CDH12P55289 CICP13-201ENST00000422015 2789 ntBASIC15.03■□□□□ -0
CDH12P55289 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.03■□□□□ -0
CDH12P55289 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.03■□□□□ -0
CDH12P55289 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.03■□□□□ -0
CDH12P55289 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDH12P55289 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.03■□□□□ -0
CDH12P55289 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CDH12P55289 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.03■□□□□ -0
CDH12P55289 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 HCG4B-203ENST00000450128 991 ntBASIC15.03■□□□□ -0
CDH12P55289 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.03■□□□□ -0
CDH12P55289 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms