Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH8P55286 PRAL-201ENST00000624952 3286 ntBASIC17.13■□□□□ 0.33
CDH8P55286 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
CDH8P55286 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDH8P55286 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDH8P55286 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH8P55286 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.12■□□□□ 0.33
CDH8P55286 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH8P55286 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH8P55286 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH8P55286 AC241585.1-201ENST00000433527 519 ntBASIC17.12■□□□□ 0.33
CDH8P55286 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.12■□□□□ 0.33
CDH8P55286 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH8P55286 AL512361.1-201ENST00000554200 418 ntBASIC17.12■□□□□ 0.33
CDH8P55286 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CDH8P55286 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH8P55286 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH8P55286 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH8P55286 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH8P55286 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDH8P55286 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CDH8P55286 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH8P55286 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH8P55286 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH8P55286 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH8P55286 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH8P55286 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 REXO1L1P-202ENST00000608646 1974 ntBASIC17.11■□□□□ 0.33
CDH8P55286 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH8P55286 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH8P55286 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH8P55286 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH8P55286 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDH8P55286 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDH8P55286 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDH8P55286 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH8P55286 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH8P55286 AZGP1P1-201ENST00000411909 902 ntBASIC17.11■□□□□ 0.33
CDH8P55286 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH8P55286 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.11■□□□□ 0.33
CDH8P55286 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH8P55286 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH8P55286 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.11■□□□□ 0.33
CDH8P55286 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH8P55286 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CDH8P55286 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDH8P55286 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH8P55286 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CDH8P55286 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDH8P55286 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH8P55286 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 BASP1P1-201ENST00000430708 665 ntBASIC17.1■□□□□ 0.33
CDH8P55286 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH8P55286 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 AC004890.2-204ENST00000481968 304 ntBASIC17.1■□□□□ 0.33
CDH8P55286 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms