Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGA2P52926 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGA2P52926 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGA2P52926 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 AC127383.1-201ENST00000444697 1800 ntBASIC14.67□□□□□ -0.06
HMGA2P52926 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGA2P52926 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGA2P52926 AC009947.1-201ENST00000444350 727 ntBASIC14.67□□□□□ -0.06
HMGA2P52926 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGA2P52926 AC092910.1-201ENST00000482027 1129 ntBASIC14.67□□□□□ -0.06
HMGA2P52926 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGA2P52926 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGA2P52926 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
HMGA2P52926 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGA2P52926 AC023141.13-201ENST00000604991 943 ntBASIC14.67□□□□□ -0.06
HMGA2P52926 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGA2P52926 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HMGA2P52926 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGA2P52926 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 BNIP3P1-202ENST00000550043 1585 ntBASIC14.67□□□□□ -0.06
HMGA2P52926 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HMGA2P52926 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGA2P52926 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 AC018892.3-201ENST00000623986 2499 ntBASIC14.67□□□□□ -0.06
HMGA2P52926 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGA2P52926 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGA2P52926 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGA2P52926 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGA2P52926 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGA2P52926 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGA2P52926 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HMGA2P52926 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.66□□□□□ -0.06
HMGA2P52926 REXO1L1P-202ENST00000608646 1974 ntBASIC14.66□□□□□ -0.06
HMGA2P52926 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HMGA2P52926 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGA2P52926 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.66□□□□□ -0.06
HMGA2P52926 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.66□□□□□ -0.06
HMGA2P52926 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGA2P52926 AC098859.1-201ENST00000502915 1238 ntBASIC14.66□□□□□ -0.06
HMGA2P52926 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.66□□□□□ -0.06
HMGA2P52926 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.66□□□□□ -0.06
HMGA2P52926 AC061975.2-201ENST00000581722 295 ntBASIC14.66□□□□□ -0.06
HMGA2P52926 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGA2P52926 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HMGA2P52926 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.66□□□□□ -0.06
HMGA2P52926 AC073389.1-201ENST00000595595 795 ntBASIC14.66□□□□□ -0.06
HMGA2P52926 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HMGA2P52926 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGA2P52926 AC010507.1-201ENST00000633895 436 ntBASIC14.66□□□□□ -0.06
HMGA2P52926 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGA2P52926 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGA2P52926 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGA2P52926 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HMGA2P52926 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGA2P52926 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGA2P52926 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGA2P52926 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
HMGA2P52926 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGA2P52926 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HMGA2P52926 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGA2P52926 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HMGA2P52926 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGA2P52926 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HMGA2P52926 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGA2P52926 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
HMGA2P52926 AC106881.1-201ENST00000605849 3329 ntBASIC14.65□□□□□ -0.06
HMGA2P52926 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HMGA2P52926 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HMGA2P52926 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HMGA2P52926 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HMGA2P52926 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms