Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.85■□□□□ 0.13
GTF2A1P52655 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GTF2A1P52655 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.85■□□□□ 0.13
GTF2A1P52655 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
GTF2A1P52655 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.84■□□□□ 0.13
GTF2A1P52655 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
GTF2A1P52655 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
GTF2A1P52655 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 AC105206.1-202ENST00000314927 2368 ntBASIC15.84■□□□□ 0.13
GTF2A1P52655 AC106818.1-201ENST00000623223 3242 ntBASIC15.84■□□□□ 0.13
GTF2A1P52655 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
GTF2A1P52655 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.84■□□□□ 0.13
GTF2A1P52655 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
GTF2A1P52655 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 AP002490.2-201ENST00000524791 560 ntBASIC15.84■□□□□ 0.13
GTF2A1P52655 AP003041.3-201ENST00000527151 707 ntBASIC15.84■□□□□ 0.13
GTF2A1P52655 AC104390.1-201ENST00000555663 520 ntBASIC15.84■□□□□ 0.13
GTF2A1P52655 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.84■□□□□ 0.13
GTF2A1P52655 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.84■□□□□ 0.13
GTF2A1P52655 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.84■□□□□ 0.13
GTF2A1P52655 FAM197Y4-202ENST00000622692 608 ntBASIC15.84■□□□□ 0.13
GTF2A1P52655 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
GTF2A1P52655 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
GTF2A1P52655 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.84■□□□□ 0.13
GTF2A1P52655 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.84■□□□□ 0.13
GTF2A1P52655 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
GTF2A1P52655 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
GTF2A1P52655 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC15.84■□□□□ 0.13
GTF2A1P52655 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC15.84■□□□□ 0.13
GTF2A1P52655 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.84■□□□□ 0.13
GTF2A1P52655 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GTF2A1P52655 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
GTF2A1P52655 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC15.83■□□□□ 0.13
GTF2A1P52655 AGAP7P-201ENST00000582299 2062 ntBASIC15.83■□□□□ 0.13
GTF2A1P52655 AGAP14-201ENST00000624701 2060 ntBASIC15.83■□□□□ 0.13
GTF2A1P52655 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
GTF2A1P52655 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
GTF2A1P52655 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
GTF2A1P52655 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
GTF2A1P52655 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
GTF2A1P52655 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
GTF2A1P52655 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.83■□□□□ 0.13
GTF2A1P52655 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.83■□□□□ 0.12
GTF2A1P52655 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.83■□□□□ 0.12
GTF2A1P52655 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.83■□□□□ 0.12
GTF2A1P52655 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
GTF2A1P52655 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.83■□□□□ 0.12
GTF2A1P52655 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.83■□□□□ 0.12
GTF2A1P52655 AC009065.1-201ENST00000564055 1225 ntBASIC15.83■□□□□ 0.12
GTF2A1P52655 AL359736.2-201ENST00000621992 437 ntBASIC15.83■□□□□ 0.12
GTF2A1P52655 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC15.83■□□□□ 0.12
GTF2A1P52655 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.83■□□□□ 0.12
GTF2A1P52655 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
GTF2A1P52655 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.83■□□□□ 0.12
GTF2A1P52655 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC15.83■□□□□ 0.12
GTF2A1P52655 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.83■□□□□ 0.12
GTF2A1P52655 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
GTF2A1P52655 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GTF2A1P52655 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
GTF2A1P52655 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC15.82■□□□□ 0.12
GTF2A1P52655 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms