Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC3P51654 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC3P51654 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
GPC3P51654 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC3P51654 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
GPC3P51654 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
GPC3P51654 AL691432.1-201ENST00000596308 1422 ntBASIC17.71■□□□□ 0.43
GPC3P51654 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GPC3P51654 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.71■□□□□ 0.43
GPC3P51654 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC3P51654 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC3P51654 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC3P51654 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
GPC3P51654 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
GPC3P51654 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
GPC3P51654 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GPC3P51654 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC3P51654 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC3P51654 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GPC3P51654 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 FO393414.2-201ENST00000405153 598 ntBASIC17.7■□□□□ 0.42
GPC3P51654 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC3P51654 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC3P51654 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.7■□□□□ 0.42
GPC3P51654 DOC2GP-202ENST00000514950 1163 ntBASIC17.7■□□□□ 0.42
GPC3P51654 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
GPC3P51654 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC3P51654 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.7■□□□□ 0.42
GPC3P51654 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
GPC3P51654 AC004461.2-201ENST00000629517 803 ntBASIC17.7■□□□□ 0.42
GPC3P51654 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GPC3P51654 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
GPC3P51654 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC3P51654 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC3P51654 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.7■□□□□ 0.42
GPC3P51654 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC3P51654 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GPC3P51654 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.69■□□□□ 0.42
GPC3P51654 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.69■□□□□ 0.42
GPC3P51654 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.69■□□□□ 0.42
GPC3P51654 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.69■□□□□ 0.42
GPC3P51654 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GPC3P51654 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 SPDYE19P-201ENST00000338590 713 ntBASIC17.69■□□□□ 0.42
GPC3P51654 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.69■□□□□ 0.42
GPC3P51654 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.69■□□□□ 0.42
GPC3P51654 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.69■□□□□ 0.42
GPC3P51654 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.69■□□□□ 0.42
GPC3P51654 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.69■□□□□ 0.42
GPC3P51654 AL353779.1-201ENST00000434793 351 ntBASIC17.69■□□□□ 0.42
GPC3P51654 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.69■□□□□ 0.42
GPC3P51654 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.69■□□□□ 0.42
GPC3P51654 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
GPC3P51654 TP53TG3HP-202ENST00000569755 579 ntBASIC17.69■□□□□ 0.42
GPC3P51654 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.69■□□□□ 0.42
GPC3P51654 SRD5A3P1-201ENST00000603021 949 ntBASIC17.69■□□□□ 0.42
GPC3P51654 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.69■□□□□ 0.42
GPC3P51654 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.69■□□□□ 0.42
GPC3P51654 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms