Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ASCL1P50553 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.36□□□□□ -0.11
ASCL1P50553 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ASCL1P50553 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ASCL1P50553 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ASCL1P50553 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.35□□□□□ -0.11
ASCL1P50553 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.35□□□□□ -0.11
ASCL1P50553 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
ASCL1P50553 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.35□□□□□ -0.11
ASCL1P50553 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ASCL1P50553 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.35□□□□□ -0.11
ASCL1P50553 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.35□□□□□ -0.11
ASCL1P50553 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.35□□□□□ -0.11
ASCL1P50553 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
ASCL1P50553 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.35□□□□□ -0.11
ASCL1P50553 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.35□□□□□ -0.11
ASCL1P50553 COX5BP8-201ENST00000416911 349 ntBASIC14.35□□□□□ -0.11
ASCL1P50553 NME2P1-201ENST00000426182 414 ntBASIC14.35□□□□□ -0.11
ASCL1P50553 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.35□□□□□ -0.11
ASCL1P50553 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.35□□□□□ -0.11
ASCL1P50553 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.35□□□□□ -0.11
ASCL1P50553 AC135586.1-201ENST00000539323 574 ntBASIC14.35□□□□□ -0.11
ASCL1P50553 AC140912.1-201ENST00000577171 1054 ntBASIC14.35□□□□□ -0.11
ASCL1P50553 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.35□□□□□ -0.11
ASCL1P50553 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.35□□□□□ -0.11
ASCL1P50553 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.35□□□□□ -0.11
ASCL1P50553 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.35□□□□□ -0.11
ASCL1P50553 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.35□□□□□ -0.11
ASCL1P50553 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.35□□□□□ -0.11
ASCL1P50553 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ASCL1P50553 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.35□□□□□ -0.11
ASCL1P50553 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.35□□□□□ -0.11
ASCL1P50553 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.35□□□□□ -0.11
ASCL1P50553 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.35□□□□□ -0.11
ASCL1P50553 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ASCL1P50553 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ASCL1P50553 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.35□□□□□ -0.11
ASCL1P50553 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.34□□□□□ -0.11
ASCL1P50553 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 CU639417.3-201ENST00000624240 1404 ntBASIC14.34□□□□□ -0.11
ASCL1P50553 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.34□□□□□ -0.11
ASCL1P50553 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 AC007541.1-201ENST00000570282 1469 ntBASIC14.34□□□□□ -0.11
ASCL1P50553 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.34□□□□□ -0.11
ASCL1P50553 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 AL353779.1-201ENST00000434793 351 ntBASIC14.34□□□□□ -0.11
ASCL1P50553 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ASCL1P50553 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.34□□□□□ -0.11
ASCL1P50553 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.34□□□□□ -0.11
ASCL1P50553 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
ASCL1P50553 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ASCL1P50553 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.34□□□□□ -0.11
ASCL1P50553 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ASCL1P50553 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ASCL1P50553 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ASCL1P50553 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms