Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
MRE11P49959 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
MRE11P49959 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.85■□□□□ 0.61
MRE11P49959 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRE11P49959 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRE11P49959 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.85■□□□□ 0.61
MRE11P49959 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRE11P49959 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRE11P49959 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MRE11P49959 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MRE11P49959 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRE11P49959 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.84■□□□□ 0.61
MRE11P49959 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.84■□□□□ 0.61
MRE11P49959 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC18.84■□□□□ 0.61
MRE11P49959 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.84■□□□□ 0.61
MRE11P49959 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
MRE11P49959 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
MRE11P49959 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.84■□□□□ 0.61
MRE11P49959 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.84■□□□□ 0.61
MRE11P49959 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.84■□□□□ 0.61
MRE11P49959 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 NUS1P2-201ENST00000417358 873 ntBASIC18.84■□□□□ 0.61
MRE11P49959 AL591424.1-201ENST00000442569 1213 ntBASIC18.84■□□□□ 0.61
MRE11P49959 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.84■□□□□ 0.61
MRE11P49959 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.84■□□□□ 0.61
MRE11P49959 AC122714.2-201ENST00000502787 707 ntBASIC18.84■□□□□ 0.61
MRE11P49959 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.84■□□□□ 0.61
MRE11P49959 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.84■□□□□ 0.61
MRE11P49959 RNF126P1-202ENST00000569893 925 ntBASIC18.84■□□□□ 0.61
MRE11P49959 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.84■□□□□ 0.61
MRE11P49959 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.84■□□□□ 0.61
MRE11P49959 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.84■□□□□ 0.61
MRE11P49959 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.84■□□□□ 0.61
MRE11P49959 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
MRE11P49959 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRE11P49959 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.84■□□□□ 0.61
MRE11P49959 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
MRE11P49959 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MRE11P49959 AC104109.2-201ENST00000602919 1418 ntBASIC18.83■□□□□ 0.61
MRE11P49959 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MRE11P49959 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
MRE11P49959 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MRE11P49959 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MRE11P49959 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
MRE11P49959 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MRE11P49959 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MRE11P49959 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
MRE11P49959 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.83■□□□□ 0.61
MRE11P49959 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
MRE11P49959 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MRE11P49959 AC013726.1-201ENST00000563747 2285 ntBASIC18.83■□□□□ 0.61
MRE11P49959 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
MRE11P49959 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRE11P49959 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRE11P49959 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MRE11P49959 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.83■□□□□ 0.6
MRE11P49959 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRE11P49959 MIR662-201ENST00000384847 95 ntBASIC18.83■□□□□ 0.6
MRE11P49959 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.83■□□□□ 0.6
MRE11P49959 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MRE11P49959 AC103564.2-201ENST00000432853 1299 ntBASIC18.83■□□□□ 0.6
MRE11P49959 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.83■□□□□ 0.6
MRE11P49959 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
MRE11P49959 IGHV3-22-201ENST00000520721 359 ntBASIC18.83■□□□□ 0.6
MRE11P49959 AC145285.3-201ENST00000564603 959 ntBASIC18.83■□□□□ 0.6
MRE11P49959 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.83■□□□□ 0.6
MRE11P49959 AC090616.6-201ENST00000582640 721 ntBASIC18.83■□□□□ 0.6
MRE11P49959 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
MRE11P49959 AL596442.2-201ENST00000610240 980 ntBASIC18.83■□□□□ 0.6
MRE11P49959 AC116407.3-201ENST00000623905 1129 ntBASIC18.83■□□□□ 0.6
MRE11P49959 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MRE11P49959 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MRE11P49959 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.83■□□□□ 0.6
MRE11P49959 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MRE11P49959 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRE11P49959 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRE11P49959 AC005840.4-201ENST00000541242 2494 ntBASIC18.83■□□□□ 0.6
MRE11P49959 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRE11P49959 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.83■□□□□ 0.6
MRE11P49959 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
MRE11P49959 SNX33P1-201ENST00000592116 1762 ntBASIC18.83■□□□□ 0.6
MRE11P49959 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MRE11P49959 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms