Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC34P49427 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.78□□□□□ -0.36
CDC34P49427 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.78□□□□□ -0.36
CDC34P49427 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.78□□□□□ -0.36
CDC34P49427 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC34P49427 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.78□□□□□ -0.36
CDC34P49427 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC34P49427 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.78□□□□□ -0.36
CDC34P49427 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CDC34P49427 AC126335.2-201ENST00000623362 4637 ntBASIC12.78□□□□□ -0.36
CDC34P49427 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.78□□□□□ -0.36
CDC34P49427 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CDC34P49427 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDC34P49427 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.78□□□□□ -0.36
CDC34P49427 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.78□□□□□ -0.36
CDC34P49427 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC34P49427 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CDC34P49427 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CDC34P49427 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDC34P49427 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC34P49427 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.78□□□□□ -0.36
CDC34P49427 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CDC34P49427 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CDC34P49427 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.77□□□□□ -0.36
CDC34P49427 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CDC34P49427 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.77□□□□□ -0.36
CDC34P49427 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CDC34P49427 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CDC34P49427 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CDC34P49427 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.77□□□□□ -0.36
CDC34P49427 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CDC34P49427 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
CDC34P49427 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.77□□□□□ -0.36
CDC34P49427 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CDC34P49427 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.77□□□□□ -0.37
CDC34P49427 TERF1P1-201ENST00000311003 1181 ntBASIC12.77□□□□□ -0.37
CDC34P49427 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CDC34P49427 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CDC34P49427 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
CDC34P49427 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CDC34P49427 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.77□□□□□ -0.37
CDC34P49427 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.77□□□□□ -0.37
CDC34P49427 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.77□□□□□ -0.37
CDC34P49427 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.77□□□□□ -0.37
CDC34P49427 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC12.77□□□□□ -0.37
CDC34P49427 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.77□□□□□ -0.37
CDC34P49427 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.77□□□□□ -0.37
CDC34P49427 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.77□□□□□ -0.37
CDC34P49427 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.77□□□□□ -0.37
CDC34P49427 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.77□□□□□ -0.37
CDC34P49427 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.77□□□□□ -0.37
CDC34P49427 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CDC34P49427 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CDC34P49427 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.77□□□□□ -0.37
CDC34P49427 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.77□□□□□ -0.37
CDC34P49427 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CDC34P49427 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC34P49427 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CDC34P49427 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CDC34P49427 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
CDC34P49427 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.76□□□□□ -0.37
CDC34P49427 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CDC34P49427 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
CDC34P49427 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.76□□□□□ -0.37
CDC34P49427 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CDC34P49427 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CDC34P49427 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 RCN1P2-201ENST00000398357 915 ntBASIC12.76□□□□□ -0.37
CDC34P49427 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.76□□□□□ -0.37
CDC34P49427 AC087499.1-201ENST00000418141 1075 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms