Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 RPSAP43-201ENST00000402237 625 ntBASIC16.76■□□□□ 0.27
MMP13P45452 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.76■□□□□ 0.27
MMP13P45452 CEND1P1-201ENST00000451006 455 ntBASIC16.76■□□□□ 0.27
MMP13P45452 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.76■□□□□ 0.27
MMP13P45452 AC112482.1-201ENST00000492080 688 ntBASIC16.76■□□□□ 0.27
MMP13P45452 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP13P45452 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.76■□□□□ 0.27
MMP13P45452 AC006486.2-201ENST00000624246 2199 ntBASIC16.76■□□□□ 0.27
MMP13P45452 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MMP13P45452 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MMP13P45452 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP13P45452 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP13P45452 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP13P45452 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.75■□□□□ 0.27
MMP13P45452 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
MMP13P45452 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.75■□□□□ 0.27
MMP13P45452 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MMP13P45452 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 AC073439.1-201ENST00000624121 1774 ntBASIC16.75■□□□□ 0.27
MMP13P45452 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.75■□□□□ 0.27
MMP13P45452 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.75■□□□□ 0.27
MMP13P45452 SPDYE11-202ENST00000450699 704 ntBASIC16.75■□□□□ 0.27
MMP13P45452 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
MMP13P45452 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP13P45452 PRYP6-201ENST00000514804 343 ntBASIC16.75■□□□□ 0.27
MMP13P45452 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.75■□□□□ 0.27
MMP13P45452 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.75■□□□□ 0.27
MMP13P45452 SPDYE9P-201ENST00000570642 692 ntBASIC16.75■□□□□ 0.27
MMP13P45452 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.75■□□□□ 0.27
MMP13P45452 AC026120.1-201ENST00000611536 926 ntBASIC16.75■□□□□ 0.27
MMP13P45452 SPDYE10P-202ENST00000612005 668 ntBASIC16.75■□□□□ 0.27
MMP13P45452 SPDYE8P-202ENST00000612377 668 ntBASIC16.75■□□□□ 0.27
MMP13P45452 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP13P45452 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 AC005622.1-201ENST00000636801 1703 ntBASIC16.75■□□□□ 0.27
MMP13P45452 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP13P45452 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
MMP13P45452 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP13P45452 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP13P45452 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MMP13P45452 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP13P45452 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.74■□□□□ 0.27
MMP13P45452 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
MMP13P45452 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MMP13P45452 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
MMP13P45452 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
MMP13P45452 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.74■□□□□ 0.27
MMP13P45452 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MMP13P45452 AC093724.1-201ENST00000448659 1027 ntBASIC16.74■□□□□ 0.27
MMP13P45452 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
MMP13P45452 YBX1P5-201ENST00000509441 847 ntBASIC16.74■□□□□ 0.27
MMP13P45452 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.74■□□□□ 0.27
MMP13P45452 MIR4469-201ENST00000583919 79 ntBASIC16.74■□□□□ 0.27
MMP13P45452 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP13P45452 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.74■□□□□ 0.27
MMP13P45452 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms