Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.2■□□□□ 0.18
LSP1P33241 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.2■□□□□ 0.18
LSP1P33241 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.2■□□□□ 0.18
LSP1P33241 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
LSP1P33241 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.2■□□□□ 0.18
LSP1P33241 REXO1L3P-201ENST00000622202 1288 ntBASIC16.2■□□□□ 0.18
LSP1P33241 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.2■□□□□ 0.18
LSP1P33241 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.2■□□□□ 0.18
LSP1P33241 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
LSP1P33241 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 BEND3P1-201ENST00000421591 1944 ntBASIC16.19■□□□□ 0.18
LSP1P33241 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.19■□□□□ 0.18
LSP1P33241 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.19■□□□□ 0.18
LSP1P33241 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.19■□□□□ 0.18
LSP1P33241 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.19■□□□□ 0.18
LSP1P33241 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LSP1P33241 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.19■□□□□ 0.18
LSP1P33241 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.19■□□□□ 0.18
LSP1P33241 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 PMS2P1-201ENST00000431037 1228 ntBASIC16.19■□□□□ 0.18
LSP1P33241 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.19■□□□□ 0.18
LSP1P33241 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.19■□□□□ 0.18
LSP1P33241 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.19■□□□□ 0.18
LSP1P33241 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.19■□□□□ 0.18
LSP1P33241 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.19■□□□□ 0.18
LSP1P33241 AL353135.1-201ENST00000606729 504 ntBASIC16.19■□□□□ 0.18
LSP1P33241 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LSP1P33241 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LSP1P33241 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.19■□□□□ 0.18
LSP1P33241 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.19■□□□□ 0.18
LSP1P33241 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LSP1P33241 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LSP1P33241 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.19■□□□□ 0.18
LSP1P33241 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LSP1P33241 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSP1P33241 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSP1P33241 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSP1P33241 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSP1P33241 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSP1P33241 PCDHA3-202ENST00000532566 4594 ntBASIC16.18■□□□□ 0.18
LSP1P33241 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
LSP1P33241 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSP1P33241 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSP1P33241 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.18■□□□□ 0.18
LSP1P33241 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LSP1P33241 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSP1P33241 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LSP1P33241 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
LSP1P33241 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSP1P33241 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSP1P33241 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LSP1P33241 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.18■□□□□ 0.18
LSP1P33241 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.18■□□□□ 0.18
LSP1P33241 KRT18P57-201ENST00000443599 1254 ntBASIC16.18■□□□□ 0.18
LSP1P33241 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.18■□□□□ 0.18
LSP1P33241 COX11P1-201ENST00000489116 835 ntBASIC16.18■□□□□ 0.18
LSP1P33241 KRT18P21-201ENST00000515767 1272 ntBASIC16.18■□□□□ 0.18
LSP1P33241 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms