Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.29■□□□□ 0.04
MMP11P24347 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP11P24347 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MMP11P24347 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.29■□□□□ 0.04
MMP11P24347 GGT4P-201ENST00000623672 1708 ntBASIC15.29■□□□□ 0.04
MMP11P24347 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP11P24347 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.28■□□□□ 0.04
MMP11P24347 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 AL589702.1-201ENST00000641229 1509 ntBASIC15.28■□□□□ 0.04
MMP11P24347 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.28■□□□□ 0.04
MMP11P24347 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP11P24347 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MMP11P24347 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.28■□□□□ 0.04
MMP11P24347 MIR661-201ENST00000384842 89 ntBASIC15.28■□□□□ 0.04
MMP11P24347 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.28■□□□□ 0.04
MMP11P24347 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.28■□□□□ 0.04
MMP11P24347 MTND6P24-201ENST00000440466 518 ntBASIC15.28■□□□□ 0.04
MMP11P24347 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.28■□□□□ 0.04
MMP11P24347 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP11P24347 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.28■□□□□ 0.04
MMP11P24347 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
MMP11P24347 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP11P24347 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.28■□□□□ 0.04
MMP11P24347 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.28■□□□□ 0.04
MMP11P24347 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.28■□□□□ 0.04
MMP11P24347 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MMP11P24347 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP11P24347 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP11P24347 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP11P24347 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MMP11P24347 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP11P24347 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MMP11P24347 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP11P24347 HYMAI-201ENST00000635591 3347 ntBASIC15.28■□□□□ 0.04
MMP11P24347 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP11P24347 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.27■□□□□ 0.04
MMP11P24347 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP11P24347 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MMP11P24347 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP11P24347 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP11P24347 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP11P24347 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MMP11P24347 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.27■□□□□ 0.04
MMP11P24347 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.27■□□□□ 0.04
MMP11P24347 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP11P24347 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MMP11P24347 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP11P24347 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.27■□□□□ 0.04
MMP11P24347 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.27■□□□□ 0.04
MMP11P24347 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
MMP11P24347 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.27■□□□□ 0.04
MMP11P24347 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.27■□□□□ 0.04
MMP11P24347 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.27■□□□□ 0.04
MMP11P24347 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.27■□□□□ 0.04
MMP11P24347 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.27■□□□□ 0.04
MMP11P24347 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP11P24347 AL603832.2-201ENST00000566195 2125 ntBASIC15.27■□□□□ 0.04
MMP11P24347 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.27■□□□□ 0.04
MMP11P24347 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.27■□□□□ 0.04
MMP11P24347 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.27■□□□□ 0.04
MMP11P24347 AL589739.1-201ENST00000607720 493 ntBASIC15.27■□□□□ 0.04
MMP11P24347 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
MMP11P24347 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP11P24347 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP11P24347 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MMP11P24347 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.27■□□□□ 0.03
MMP11P24347 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP11P24347 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
MMP11P24347 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP11P24347 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP11P24347 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
MMP11P24347 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP11P24347 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP11P24347 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP11P24347 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
MMP11P24347 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP11P24347 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms