Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.07■□□□□ 0.16
CHRM3P20309 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.07■□□□□ 0.16
CHRM3P20309 AC098859.1-201ENST00000502915 1238 ntBASIC16.07■□□□□ 0.16
CHRM3P20309 IGHV3-62-201ENST00000520057 340 ntBASIC16.07■□□□□ 0.16
CHRM3P20309 AC243562.1-201ENST00000560672 389 ntBASIC16.07■□□□□ 0.16
CHRM3P20309 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
CHRM3P20309 AC073389.1-201ENST00000595595 795 ntBASIC16.07■□□□□ 0.16
CHRM3P20309 SPTSSB-204ENST00000617024 1292 ntBASIC16.07■□□□□ 0.16
CHRM3P20309 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.07■□□□□ 0.16
CHRM3P20309 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CHRM3P20309 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.07■□□□□ 0.16
CHRM3P20309 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CHRM3P20309 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.07■□□□□ 0.16
CHRM3P20309 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CHRM3P20309 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM3P20309 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
CHRM3P20309 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CHRM3P20309 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRM3P20309 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM3P20309 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM3P20309 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM3P20309 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM3P20309 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRM3P20309 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM3P20309 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CHRM3P20309 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRM3P20309 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRM3P20309 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CHRM3P20309 HAUS4P1-201ENST00000406739 1145 ntBASIC16.06■□□□□ 0.16
CHRM3P20309 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM3P20309 DNAJB3-201ENST00000446806 729 ntBASIC16.06■□□□□ 0.16
CHRM3P20309 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.06■□□□□ 0.16
CHRM3P20309 CEND1P1-201ENST00000451006 455 ntBASIC16.06■□□□□ 0.16
CHRM3P20309 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.06■□□□□ 0.16
CHRM3P20309 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRM3P20309 ALG1L5P-201ENST00000482043 771 ntBASIC16.06■□□□□ 0.16
CHRM3P20309 KRT8P48-201ENST00000515599 1220 ntBASIC16.06■□□□□ 0.16
CHRM3P20309 AC005829.1-201ENST00000570002 483 ntBASIC16.06■□□□□ 0.16
CHRM3P20309 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM3P20309 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRM3P20309 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRM3P20309 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRM3P20309 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
CHRM3P20309 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM3P20309 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM3P20309 DBET-201ENST00000630918 3363 ntBASIC16.06■□□□□ 0.16
CHRM3P20309 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CHRM3P20309 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CHRM3P20309 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.06■□□□□ 0.16
CHRM3P20309 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHRM3P20309 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM3P20309 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM3P20309 AC069224.1-201ENST00000566372 1715 ntBASIC16.05■□□□□ 0.16
CHRM3P20309 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM3P20309 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CHRM3P20309 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM3P20309 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM3P20309 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM3P20309 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM3P20309 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHRM3P20309 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.05■□□□□ 0.16
CHRM3P20309 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM3P20309 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.05■□□□□ 0.16
CHRM3P20309 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM3P20309 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM3P20309 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CHRM3P20309 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM3P20309 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM3P20309 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM3P20309 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms