Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NCLP19338 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCLP19338 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCLP19338 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCLP19338 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCLP19338 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCLP19338 REXO1L8P-201ENST00000604378 1897 ntBASIC19.27■□□□□ 0.68
NCLP19338 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCLP19338 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NCLP19338 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCLP19338 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.27■□□□□ 0.68
NCLP19338 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.27■□□□□ 0.68
NCLP19338 PRYP5-201ENST00000451909 266 ntBASIC19.27■□□□□ 0.68
NCLP19338 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NCLP19338 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.27■□□□□ 0.68
NCLP19338 AC139887.3-201ENST00000568585 713 ntBASIC19.27■□□□□ 0.68
NCLP19338 MPDU1-223ENST00000582151 728 ntBASIC19.27■□□□□ 0.68
NCLP19338 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NCLP19338 AL139424.1-201ENST00000607572 797 ntBASIC19.27■□□□□ 0.68
NCLP19338 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
NCLP19338 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NCLP19338 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCLP19338 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.27■□□□□ 0.68
NCLP19338 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCLP19338 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCLP19338 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCLP19338 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
NCLP19338 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLP19338 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLP19338 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLP19338 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.26■□□□□ 0.67
NCLP19338 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NCLP19338 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NCLP19338 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NCLP19338 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.26■□□□□ 0.67
NCLP19338 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NCLP19338 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLP19338 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NCLP19338 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCLP19338 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
NCLP19338 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLP19338 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLP19338 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.26■□□□□ 0.67
NCLP19338 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.26■□□□□ 0.67
NCLP19338 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.26■□□□□ 0.67
NCLP19338 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.26■□□□□ 0.67
NCLP19338 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
NCLP19338 AL671883.3-201ENST00000603274 991 ntBASIC19.26■□□□□ 0.67
NCLP19338 AC025062.2-201ENST00000605477 670 ntBASIC19.26■□□□□ 0.67
NCLP19338 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.26■□□□□ 0.67
NCLP19338 AF228730.7-201ENST00000641842 219 ntBASIC19.26■□□□□ 0.67
NCLP19338 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLP19338 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLP19338 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.26■□□□□ 0.67
NCLP19338 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLP19338 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLP19338 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.25■□□□□ 0.67
NCLP19338 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.25■□□□□ 0.67
NCLP19338 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NCLP19338 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NCLP19338 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.25■□□□□ 0.67
NCLP19338 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.25■□□□□ 0.67
NCLP19338 RPS2P1-201ENST00000434010 821 ntBASIC19.25■□□□□ 0.67
NCLP19338 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.25■□□□□ 0.67
NCLP19338 SLC25A1P1-201ENST00000528351 927 ntBASIC19.25■□□□□ 0.67
NCLP19338 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.25■□□□□ 0.67
NCLP19338 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.25■□□□□ 0.67
NCLP19338 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.25■□□□□ 0.67
NCLP19338 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NCLP19338 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NCLP19338 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.25■□□□□ 0.67
NCLP19338 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC19.25■□□□□ 0.67
NCLP19338 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NCLP19338 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NCLP19338 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
NCLP19338 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NCLP19338 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NCLP19338 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 KRT8P39-201ENST00000396270 1433 ntBASIC19.25■□□□□ 0.67
NCLP19338 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCLP19338 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
NCLP19338 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms