Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT4P19013 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
KRT4P19013 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT4P19013 IGHV3-65-201ENST00000523210 341 ntBASIC16.2■□□□□ 0.18
KRT4P19013 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
KRT4P19013 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT4P19013 AL121772.3-201ENST00000610840 674 ntBASIC16.2■□□□□ 0.18
KRT4P19013 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.2■□□□□ 0.18
KRT4P19013 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT4P19013 REXO1L6P-202ENST00000619970 1078 ntBASIC16.2■□□□□ 0.18
KRT4P19013 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT4P19013 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
KRT4P19013 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT4P19013 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT4P19013 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT4P19013 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
KRT4P19013 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT4P19013 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
KRT4P19013 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT4P19013 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
KRT4P19013 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 AC091951.1-201ENST00000512854 2465 ntBASIC16.19■□□□□ 0.18
KRT4P19013 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
KRT4P19013 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT4P19013 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 AC093724.1-201ENST00000448659 1027 ntBASIC16.19■□□□□ 0.18
KRT4P19013 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.19■□□□□ 0.18
KRT4P19013 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT4P19013 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT4P19013 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT4P19013 AL031055.1-201ENST00000606362 631 ntBASIC16.19■□□□□ 0.18
KRT4P19013 AC093458.2-201ENST00000623150 629 ntBASIC16.19■□□□□ 0.18
KRT4P19013 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT4P19013 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
KRT4P19013 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
KRT4P19013 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT4P19013 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 MIR600HG-201ENST00000449175 5984 ntBASIC16.19■□□□□ 0.18
KRT4P19013 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
KRT4P19013 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT4P19013 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT4P19013 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT4P19013 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KRT4P19013 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KRT4P19013 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
KRT4P19013 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT4P19013 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
KRT4P19013 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT4P19013 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT4P19013 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.18■□□□□ 0.18
KRT4P19013 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT4P19013 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT4P19013 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT4P19013 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT4P19013 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
KRT4P19013 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
KRT4P19013 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT4P19013 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms