Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17■□□□□ 0.31
PTPN1P18031 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17■□□□□ 0.31
PTPN1P18031 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17■□□□□ 0.31
PTPN1P18031 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN1P18031 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17■□□□□ 0.31
PTPN1P18031 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PTPN1P18031 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17■□□□□ 0.31
PTPN1P18031 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17■□□□□ 0.31
PTPN1P18031 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17■□□□□ 0.31
PTPN1P18031 AC044860.1-202ENST00000559481 777 ntBASIC17■□□□□ 0.31
PTPN1P18031 MIR3197-201ENST00000582241 73 ntBASIC17■□□□□ 0.31
PTPN1P18031 RN7SL204P-201ENST00000582831 262 ntBASIC17■□□□□ 0.31
PTPN1P18031 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN1P18031 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17■□□□□ 0.31
PTPN1P18031 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17■□□□□ 0.31
PTPN1P18031 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17■□□□□ 0.31
PTPN1P18031 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN1P18031 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN1P18031 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN1P18031 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17■□□□□ 0.31
PTPN1P18031 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PTPN1P18031 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PTPN1P18031 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN1P18031 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN1P18031 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN1P18031 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN1P18031 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN1P18031 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PTPN1P18031 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PTPN1P18031 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
PTPN1P18031 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 AZGP1P1-201ENST00000411909 902 ntBASIC16.99■□□□□ 0.31
PTPN1P18031 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PTPN1P18031 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN1P18031 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN1P18031 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PTPN1P18031 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.99■□□□□ 0.31
PTPN1P18031 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
PTPN1P18031 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN1P18031 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PTPN1P18031 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN1P18031 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN1P18031 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN1P18031 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PTPN1P18031 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN1P18031 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PTPN1P18031 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PTPN1P18031 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 AC236430.1-201ENST00000402231 743 ntBASIC16.98■□□□□ 0.31
PTPN1P18031 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN1P18031 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 AC002472.2-201ENST00000442739 958 ntBASIC16.98■□□□□ 0.31
PTPN1P18031 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.98■□□□□ 0.31
PTPN1P18031 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 SDHAP3-202ENST00000515467 728 ntBASIC16.98■□□□□ 0.31
PTPN1P18031 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.98■□□□□ 0.31
PTPN1P18031 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.98■□□□□ 0.31
PTPN1P18031 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.98■□□□□ 0.31
PTPN1P18031 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PTPN1P18031 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.98■□□□□ 0.31
PTPN1P18031 LINC02560-201ENST00000596379 459 ntBASIC16.98■□□□□ 0.31
PTPN1P18031 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.98■□□□□ 0.31
PTPN1P18031 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.98■□□□□ 0.31
PTPN1P18031 AC004840.1-201ENST00000636359 365 ntBASIC16.98■□□□□ 0.31
PTPN1P18031 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PTPN1P18031 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN1P18031 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN1P18031 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
PTPN1P18031 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.98■□□□□ 0.31
PTPN1P18031 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN1P18031 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms