Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYN1P17600 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYN1P17600 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYN1P17600 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYN1P17600 AL645728.1-201ENST00000366221 2101 ntBASIC17.3■□□□□ 0.36
SYN1P17600 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SYN1P17600 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.3■□□□□ 0.36
SYN1P17600 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
SYN1P17600 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.3■□□□□ 0.36
SYN1P17600 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYN1P17600 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SYN1P17600 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.3■□□□□ 0.36
SYN1P17600 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SYN1P17600 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.29■□□□□ 0.36
SYN1P17600 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.29■□□□□ 0.36
SYN1P17600 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SYN1P17600 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.29■□□□□ 0.36
SYN1P17600 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.29■□□□□ 0.36
SYN1P17600 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 AC016700.1-201ENST00000429424 312 ntBASIC17.29■□□□□ 0.36
SYN1P17600 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.29■□□□□ 0.36
SYN1P17600 AC069218.1-201ENST00000435269 762 ntBASIC17.29■□□□□ 0.36
SYN1P17600 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.29■□□□□ 0.36
SYN1P17600 MAGEA5-201ENST00000446757 942 ntBASIC17.29■□□□□ 0.36
SYN1P17600 EEF1DP6-201ENST00000449232 372 ntBASIC17.29■□□□□ 0.36
SYN1P17600 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.29■□□□□ 0.36
SYN1P17600 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.29■□□□□ 0.36
SYN1P17600 COX5BP1-201ENST00000507622 393 ntBASIC17.29■□□□□ 0.36
SYN1P17600 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.29■□□□□ 0.36
SYN1P17600 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.29■□□□□ 0.36
SYN1P17600 AC126915.1-201ENST00000522847 1038 ntBASIC17.29■□□□□ 0.36
SYN1P17600 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.29■□□□□ 0.36
SYN1P17600 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.29■□□□□ 0.36
SYN1P17600 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.29■□□□□ 0.36
SYN1P17600 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.29■□□□□ 0.36
SYN1P17600 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.29■□□□□ 0.36
SYN1P17600 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.29■□□□□ 0.36
SYN1P17600 AC079336.7-201ENST00000623428 1078 ntBASIC17.29■□□□□ 0.36
SYN1P17600 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.29■□□□□ 0.36
SYN1P17600 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.29■□□□□ 0.36
SYN1P17600 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.29■□□□□ 0.36
SYN1P17600 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.29■□□□□ 0.36
SYN1P17600 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SYN1P17600 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SYN1P17600 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SYN1P17600 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SYN1P17600 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SYN1P17600 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.28■□□□□ 0.36
SYN1P17600 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.28■□□□□ 0.36
SYN1P17600 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.28■□□□□ 0.36
SYN1P17600 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.28■□□□□ 0.36
SYN1P17600 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.28■□□□□ 0.36
SYN1P17600 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.28■□□□□ 0.36
SYN1P17600 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.28■□□□□ 0.36
SYN1P17600 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.28■□□□□ 0.36
SYN1P17600 PRKXP1-201ENST00000561423 1122 ntBASIC17.28■□□□□ 0.36
SYN1P17600 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.28■□□□□ 0.36
SYN1P17600 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.28■□□□□ 0.36
SYN1P17600 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SYN1P17600 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SYN1P17600 PCGF3-213ENST00000620529 1899 ntBASIC17.28■□□□□ 0.36
SYN1P17600 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.28■□□□□ 0.36
SYN1P17600 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SYN1P17600 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYN1P17600 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.27■□□□□ 0.36
SYN1P17600 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SYN1P17600 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms