Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.17□□□□□ -0.14
UBCP0CG48 AC092910.1-201ENST00000482027 1129 ntBASIC14.17□□□□□ -0.14
UBCP0CG48 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.17□□□□□ -0.14
UBCP0CG48 UNC93B7-201ENST00000509439 705 ntBASIC14.17□□□□□ -0.14
UBCP0CG48 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.17□□□□□ -0.14
UBCP0CG48 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.17□□□□□ -0.14
UBCP0CG48 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.17□□□□□ -0.14
UBCP0CG48 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.17□□□□□ -0.14
UBCP0CG48 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.17□□□□□ -0.14
UBCP0CG48 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.17□□□□□ -0.14
UBCP0CG48 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.17□□□□□ -0.14
UBCP0CG48 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
UBCP0CG48 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.17□□□□□ -0.14
UBCP0CG48 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.17□□□□□ -0.14
UBCP0CG48 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 AC011477.6-201ENST00000604980 1927 ntBASIC14.17□□□□□ -0.14
UBCP0CG48 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.17□□□□□ -0.14
UBCP0CG48 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBCP0CG48 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
UBCP0CG48 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.16□□□□□ -0.14
UBCP0CG48 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 AC073347.1-201ENST00000421633 2643 ntBASIC14.16□□□□□ -0.14
UBCP0CG48 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UBCP0CG48 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.16□□□□□ -0.14
UBCP0CG48 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.16□□□□□ -0.14
UBCP0CG48 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.16□□□□□ -0.14
UBCP0CG48 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 KRT18P56-201ENST00000507275 550 ntBASIC14.16□□□□□ -0.14
UBCP0CG48 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.16□□□□□ -0.14
UBCP0CG48 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.16□□□□□ -0.14
UBCP0CG48 AL009183.1-201ENST00000603760 355 ntBASIC14.16□□□□□ -0.14
UBCP0CG48 AL078644.1-201ENST00000609881 752 ntBASIC14.16□□□□□ -0.14
UBCP0CG48 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.16□□□□□ -0.14
UBCP0CG48 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.16□□□□□ -0.14
UBCP0CG48 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.16□□□□□ -0.14
UBCP0CG48 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.16□□□□□ -0.14
UBCP0CG48 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.16□□□□□ -0.14
UBCP0CG48 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UBCP0CG48 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
UBCP0CG48 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UBCP0CG48 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UBCP0CG48 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBCP0CG48 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.15□□□□□ -0.14
UBCP0CG48 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.15□□□□□ -0.14
UBCP0CG48 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
UBCP0CG48 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.15□□□□□ -0.14
UBCP0CG48 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.15□□□□□ -0.14
UBCP0CG48 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.15□□□□□ -0.14
UBCP0CG48 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.15□□□□□ -0.14
UBCP0CG48 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.15□□□□□ -0.14
UBCP0CG48 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.15□□□□□ -0.14
UBCP0CG48 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
UBCP0CG48 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
UBCP0CG48 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms