Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.59□□□□□ -0.07
FREM3P0C091 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FREM3P0C091 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
FREM3P0C091 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.58□□□□□ -0.07
FREM3P0C091 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
FREM3P0C091 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
FREM3P0C091 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.58□□□□□ -0.07
FREM3P0C091 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
FREM3P0C091 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
FREM3P0C091 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.58□□□□□ -0.08
FREM3P0C091 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
FREM3P0C091 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.58□□□□□ -0.08
FREM3P0C091 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
FREM3P0C091 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.58□□□□□ -0.08
FREM3P0C091 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
FREM3P0C091 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 POU5F1P6-201ENST00000466990 990 ntBASIC14.58□□□□□ -0.08
FREM3P0C091 RNA5SP421-201ENST00000516864 134 ntBASIC14.58□□□□□ -0.08
FREM3P0C091 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.58□□□□□ -0.08
FREM3P0C091 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.58□□□□□ -0.08
FREM3P0C091 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.58□□□□□ -0.08
FREM3P0C091 AL603832.2-201ENST00000566195 2125 ntBASIC14.58□□□□□ -0.08
FREM3P0C091 AC104794.3-201ENST00000566840 1248 ntBASIC14.58□□□□□ -0.08
FREM3P0C091 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
FREM3P0C091 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.58□□□□□ -0.08
FREM3P0C091 MIR3197-201ENST00000582241 73 ntBASIC14.58□□□□□ -0.08
FREM3P0C091 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.58□□□□□ -0.08
FREM3P0C091 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.58□□□□□ -0.08
FREM3P0C091 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
FREM3P0C091 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.58□□□□□ -0.08
FREM3P0C091 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.58□□□□□ -0.08
FREM3P0C091 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
FREM3P0C091 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.57□□□□□ -0.08
FREM3P0C091 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
FREM3P0C091 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.57□□□□□ -0.08
FREM3P0C091 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.57□□□□□ -0.08
FREM3P0C091 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.57□□□□□ -0.08
FREM3P0C091 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.57□□□□□ -0.08
FREM3P0C091 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.57□□□□□ -0.08
FREM3P0C091 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.57□□□□□ -0.08
FREM3P0C091 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.57□□□□□ -0.08
FREM3P0C091 AL132655.2-201ENST00000596276 594 ntBASIC14.57□□□□□ -0.08
FREM3P0C091 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
FREM3P0C091 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
FREM3P0C091 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
FREM3P0C091 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
FREM3P0C091 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
FREM3P0C091 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.57□□□□□ -0.08
FREM3P0C091 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
FREM3P0C091 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
FREM3P0C091 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.57□□□□□ -0.08
FREM3P0C091 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.57□□□□□ -0.08
FREM3P0C091 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.57□□□□□ -0.08
FREM3P0C091 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.57□□□□□ -0.08
FREM3P0C091 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.57□□□□□ -0.08
FREM3P0C091 AC025048.6-201ENST00000634326 1161 ntBASIC14.57□□□□□ -0.08
FREM3P0C091 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.57□□□□□ -0.08
FREM3P0C091 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.57□□□□□ -0.08
FREM3P0C091 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.57□□□□□ -0.08
FREM3P0C091 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.57□□□□□ -0.08
FREM3P0C091 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
FREM3P0C091 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
FREM3P0C091 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.56□□□□□ -0.08
FREM3P0C091 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms