Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS1P07996 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
THBS1P07996 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
THBS1P07996 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS1P07996 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS1P07996 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
THBS1P07996 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
THBS1P07996 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS1P07996 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
THBS1P07996 AL691432.1-201ENST00000596308 1422 ntBASIC14.83□□□□□ -0.04
THBS1P07996 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS1P07996 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS1P07996 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
THBS1P07996 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.83□□□□□ -0.04
THBS1P07996 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
THBS1P07996 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS1P07996 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS1P07996 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.82□□□□□ -0.04
THBS1P07996 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.82□□□□□ -0.04
THBS1P07996 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS1P07996 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
THBS1P07996 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
THBS1P07996 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 HLA-H-201ENST00000383620 1096 ntBASIC14.82□□□□□ -0.04
THBS1P07996 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS1P07996 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.82□□□□□ -0.04
THBS1P07996 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.82□□□□□ -0.04
THBS1P07996 MKNK2P1-201ENST00000437526 628 ntBASIC14.82□□□□□ -0.04
THBS1P07996 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.82□□□□□ -0.04
THBS1P07996 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.82□□□□□ -0.04
THBS1P07996 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
THBS1P07996 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.82□□□□□ -0.04
THBS1P07996 AP000842.3-202ENST00000569238 1080 ntBASIC14.82□□□□□ -0.04
THBS1P07996 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.82□□□□□ -0.04
THBS1P07996 C20orf181-201ENST00000623918 480 ntBASIC14.82□□□□□ -0.04
THBS1P07996 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
THBS1P07996 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
THBS1P07996 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
THBS1P07996 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS1P07996 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS1P07996 AC126177.1-201ENST00000547829 2218 ntBASIC14.82□□□□□ -0.04
THBS1P07996 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS1P07996 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
THBS1P07996 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.82□□□□□ -0.04
THBS1P07996 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
THBS1P07996 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.82□□□□□ -0.04
THBS1P07996 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS1P07996 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
THBS1P07996 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.82□□□□□ -0.04
THBS1P07996 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THBS1P07996 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
THBS1P07996 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.82□□□□□ -0.04
THBS1P07996 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
THBS1P07996 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.81□□□□□ -0.04
THBS1P07996 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.81□□□□□ -0.04
THBS1P07996 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
THBS1P07996 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 AC020658.6-201ENST00000623564 1870 ntBASIC14.81□□□□□ -0.04
THBS1P07996 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.81□□□□□ -0.04
THBS1P07996 AC004987.2-201ENST00000395959 1148 ntBASIC14.81□□□□□ -0.04
THBS1P07996 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.81□□□□□ -0.04
THBS1P07996 SPCS2P4-201ENST00000436160 681 ntBASIC14.81□□□□□ -0.04
THBS1P07996 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.81□□□□□ -0.04
THBS1P07996 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
THBS1P07996 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.81□□□□□ -0.04
THBS1P07996 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.81□□□□□ -0.04
THBS1P07996 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC14.81□□□□□ -0.04
THBS1P07996 RNA5SP410-201ENST00000516285 106 ntBASIC14.81□□□□□ -0.04
THBS1P07996 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.81□□□□□ -0.04
THBS1P07996 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.81□□□□□ -0.04
THBS1P07996 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
THBS1P07996 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
THBS1P07996 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
THBS1P07996 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms