Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 AC023824.1-201ENST00000562945 2975 ntBASIC14.35□□□□□ -0.11
ERCC1P07992 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.35□□□□□ -0.11
ERCC1P07992 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.35□□□□□ -0.11
ERCC1P07992 AC140658.5-201ENST00000438532 169 ntBASIC14.35□□□□□ -0.11
ERCC1P07992 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.35□□□□□ -0.11
ERCC1P07992 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.35□□□□□ -0.11
ERCC1P07992 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.35□□□□□ -0.11
ERCC1P07992 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.35□□□□□ -0.11
ERCC1P07992 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.35□□□□□ -0.11
ERCC1P07992 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.35□□□□□ -0.11
ERCC1P07992 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.35□□□□□ -0.11
ERCC1P07992 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
ERCC1P07992 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.35□□□□□ -0.11
ERCC1P07992 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.35□□□□□ -0.11
ERCC1P07992 KRT18P28-201ENST00000453838 1332 ntBASIC14.35□□□□□ -0.11
ERCC1P07992 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.35□□□□□ -0.11
ERCC1P07992 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.35□□□□□ -0.11
ERCC1P07992 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ERCC1P07992 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.35□□□□□ -0.11
ERCC1P07992 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ERCC1P07992 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.34□□□□□ -0.11
ERCC1P07992 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.34□□□□□ -0.11
ERCC1P07992 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.34□□□□□ -0.11
ERCC1P07992 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.34□□□□□ -0.11
ERCC1P07992 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ERCC1P07992 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.34□□□□□ -0.11
ERCC1P07992 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.34□□□□□ -0.11
ERCC1P07992 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.34□□□□□ -0.11
ERCC1P07992 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.34□□□□□ -0.11
ERCC1P07992 AC107918.2-201ENST00000530817 355 ntBASIC14.34□□□□□ -0.11
ERCC1P07992 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 AC087641.1-201ENST00000557561 1021 ntBASIC14.34□□□□□ -0.11
ERCC1P07992 AP002472.1-201ENST00000577490 586 ntBASIC14.34□□□□□ -0.11
ERCC1P07992 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.34□□□□□ -0.11
ERCC1P07992 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.34□□□□□ -0.11
ERCC1P07992 CYP2A7P1-201ENST00000595391 815 ntBASIC14.34□□□□□ -0.11
ERCC1P07992 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.34□□□□□ -0.11
ERCC1P07992 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
ERCC1P07992 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ERCC1P07992 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.34□□□□□ -0.11
ERCC1P07992 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.34□□□□□ -0.11
ERCC1P07992 DBET-201ENST00000630918 3363 ntBASIC14.34□□□□□ -0.11
ERCC1P07992 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERCC1P07992 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
ERCC1P07992 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
ERCC1P07992 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ERCC1P07992 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ERCC1P07992 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ERCC1P07992 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ERCC1P07992 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
ERCC1P07992 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.33□□□□□ -0.11
ERCC1P07992 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ERCC1P07992 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
ERCC1P07992 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ERCC1P07992 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.33□□□□□ -0.12
ERCC1P07992 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms