Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SFTPBP07988 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SFTPBP07988 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SFTPBP07988 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SFTPBP07988 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.08□□□□□ -0.16
SFTPBP07988 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SFTPBP07988 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.08□□□□□ -0.16
SFTPBP07988 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
SFTPBP07988 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.08□□□□□ -0.16
SFTPBP07988 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.08□□□□□ -0.16
SFTPBP07988 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.08□□□□□ -0.16
SFTPBP07988 AC018845.2-201ENST00000568326 409 ntBASIC14.08□□□□□ -0.16
SFTPBP07988 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SFTPBP07988 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.08□□□□□ -0.16
SFTPBP07988 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.08□□□□□ -0.16
SFTPBP07988 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SFTPBP07988 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.08□□□□□ -0.16
SFTPBP07988 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.08□□□□□ -0.16
SFTPBP07988 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SFTPBP07988 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SFTPBP07988 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SFTPBP07988 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SFTPBP07988 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SFTPBP07988 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.08□□□□□ -0.16
SFTPBP07988 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SFTPBP07988 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SFTPBP07988 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 AC010491.1-201ENST00000563101 2797 ntBASIC14.07□□□□□ -0.16
SFTPBP07988 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SFTPBP07988 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SFTPBP07988 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.07□□□□□ -0.16
SFTPBP07988 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 POU5F1P6-201ENST00000466990 990 ntBASIC14.07□□□□□ -0.16
SFTPBP07988 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SFTPBP07988 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.07□□□□□ -0.16
SFTPBP07988 AC040169.1-201ENST00000565382 521 ntBASIC14.07□□□□□ -0.16
SFTPBP07988 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.07□□□□□ -0.16
SFTPBP07988 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.07□□□□□ -0.16
SFTPBP07988 AC006538.3-201ENST00000612495 578 ntBASIC14.07□□□□□ -0.16
SFTPBP07988 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
SFTPBP07988 AC010654.1-201ENST00000615722 808 ntBASIC14.07□□□□□ -0.16
SFTPBP07988 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.07□□□□□ -0.16
SFTPBP07988 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.07□□□□□ -0.16
SFTPBP07988 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.07□□□□□ -0.16
SFTPBP07988 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
SFTPBP07988 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SFTPBP07988 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SFTPBP07988 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SFTPBP07988 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
SFTPBP07988 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.07□□□□□ -0.16
SFTPBP07988 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 AL603832.2-201ENST00000566195 2125 ntBASIC14.06□□□□□ -0.16
SFTPBP07988 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
SFTPBP07988 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.06□□□□□ -0.16
SFTPBP07988 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.06□□□□□ -0.16
SFTPBP07988 AC012569.1-201ENST00000591191 1524 ntBASIC14.06□□□□□ -0.16
SFTPBP07988 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SFTPBP07988 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.06□□□□□ -0.16
SFTPBP07988 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SFTPBP07988 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SFTPBP07988 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SFTPBP07988 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms