Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 KRT8P37-201ENST00000451609 1420 ntBASIC16.28■□□□□ 0.2
HLA-DQB2P05538 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 CICP6-201ENST00000457191 2729 ntBASIC16.28■□□□□ 0.2
HLA-DQB2P05538 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.28■□□□□ 0.2
HLA-DQB2P05538 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 METTL21AP1-201ENST00000438852 635 ntBASIC16.28■□□□□ 0.2
HLA-DQB2P05538 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB2P05538 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 AL035456.1-201ENST00000456064 1369 ntBASIC16.27■□□□□ 0.2
HLA-DQB2P05538 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 GPALPP1-207ENST00000611650 899 ntBASIC16.27■□□□□ 0.2
HLA-DQB2P05538 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB2P05538 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms