Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOD2P04179 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOD2P04179 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOD2P04179 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOD2P04179 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOD2P04179 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SOD2P04179 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOD2P04179 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.8■□□□□ 0.28
SOD2P04179 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.8■□□□□ 0.28
SOD2P04179 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SOD2P04179 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.8■□□□□ 0.28
SOD2P04179 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOD2P04179 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOD2P04179 VDAC1P7-201ENST00000462417 847 ntBASIC16.8■□□□□ 0.28
SOD2P04179 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.8■□□□□ 0.28
SOD2P04179 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOD2P04179 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.8■□□□□ 0.28
SOD2P04179 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOD2P04179 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.8■□□□□ 0.28
SOD2P04179 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.8■□□□□ 0.28
SOD2P04179 AC000095.1-201ENST00000603208 874 ntBASIC16.8■□□□□ 0.28
SOD2P04179 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOD2P04179 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SOD2P04179 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOD2P04179 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SOD2P04179 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.8■□□□□ 0.28
SOD2P04179 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SOD2P04179 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SOD2P04179 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOD2P04179 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.8■□□□□ 0.28
SOD2P04179 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.8■□□□□ 0.28
SOD2P04179 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.79■□□□□ 0.28
SOD2P04179 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.79■□□□□ 0.28
SOD2P04179 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.79■□□□□ 0.28
SOD2P04179 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SOD2P04179 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.79■□□□□ 0.28
SOD2P04179 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SOD2P04179 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.79■□□□□ 0.28
SOD2P04179 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SOD2P04179 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.79■□□□□ 0.28
SOD2P04179 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.79■□□□□ 0.28
SOD2P04179 BCRP2-202ENST00000447763 634 ntBASIC16.79■□□□□ 0.28
SOD2P04179 BCRP6-201ENST00000510112 632 ntBASIC16.79■□□□□ 0.28
SOD2P04179 BCRP7-201ENST00000511549 544 ntBASIC16.79■□□□□ 0.28
SOD2P04179 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.79■□□□□ 0.28
SOD2P04179 AP001889.1-201ENST00000525414 633 ntBASIC16.79■□□□□ 0.28
SOD2P04179 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.79■□□□□ 0.28
SOD2P04179 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.79■□□□□ 0.28
SOD2P04179 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.79■□□□□ 0.28
SOD2P04179 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 AL607033.1-201ENST00000623900 1599 ntBASIC16.79■□□□□ 0.28
SOD2P04179 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.79■□□□□ 0.28
SOD2P04179 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.79■□□□□ 0.28
SOD2P04179 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SOD2P04179 REXO1L6P-201ENST00000603433 1515 ntBASIC16.79■□□□□ 0.28
SOD2P04179 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SOD2P04179 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.79■□□□□ 0.28
SOD2P04179 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SOD2P04179 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOD2P04179 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.79■□□□□ 0.28
SOD2P04179 AC022211.2-201ENST00000585075 2527 ntBASIC16.78■□□□□ 0.28
SOD2P04179 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.78■□□□□ 0.28
SOD2P04179 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOD2P04179 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.78■□□□□ 0.28
SOD2P04179 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SOD2P04179 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOD2P04179 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SOD2P04179 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.78■□□□□ 0.28
SOD2P04179 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOD2P04179 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOD2P04179 AC093525.8-201ENST00000624099 1342 ntBASIC16.78■□□□□ 0.28
SOD2P04179 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.78■□□□□ 0.28
SOD2P04179 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.78■□□□□ 0.28
SOD2P04179 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.78■□□□□ 0.28
SOD2P04179 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.78■□□□□ 0.28
SOD2P04179 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOD2P04179 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOD2P04179 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SOD2P04179 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.78■□□□□ 0.28
SOD2P04179 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SOD2P04179 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.78■□□□□ 0.28
SOD2P04179 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.78■□□□□ 0.28
SOD2P04179 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.78■□□□□ 0.28
SOD2P04179 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms