Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.08■□□□□ 0
TRIM3O75382 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
TRIM3O75382 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.08■□□□□ 0
TRIM3O75382 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.08■□□□□ 0
TRIM3O75382 KRT18P32-201ENST00000424695 1287 ntBASIC15.08■□□□□ 0
TRIM3O75382 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.08■□□□□ 0
TRIM3O75382 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRIM3O75382 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
TRIM3O75382 AP000842.3-202ENST00000569238 1080 ntBASIC15.08■□□□□ 0
TRIM3O75382 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.08■□□□□ 0
TRIM3O75382 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.08■□□□□ 0
TRIM3O75382 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.08■□□□□ 0
TRIM3O75382 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRIM3O75382 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TRIM3O75382 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 AC092171.3-201ENST00000610122 2651 ntBASIC15.08■□□□□ 0
TRIM3O75382 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
TRIM3O75382 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.08■□□□□ 0
TRIM3O75382 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRIM3O75382 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM3O75382 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TRIM3O75382 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.07■□□□□ 0
TRIM3O75382 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRIM3O75382 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 UXT-AS1-201ENST00000590504 1525 ntBASIC15.07■□□□□ 0
TRIM3O75382 TCAF2P1-201ENST00000291129 2421 ntBASIC15.07■□□□□ 0
TRIM3O75382 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TRIM3O75382 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.07■□□□□ 0
TRIM3O75382 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TRIM3O75382 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.07■□□□□ 0
TRIM3O75382 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
TRIM3O75382 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.07■□□□□ 0
TRIM3O75382 GPS2P2-201ENST00000430745 888 ntBASIC15.07■□□□□ 0
TRIM3O75382 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.07■□□□□ 0
TRIM3O75382 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRIM3O75382 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.07■□□□□ 0
TRIM3O75382 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.07■□□□□ 0
TRIM3O75382 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 AC109322.1-201ENST00000524499 1264 ntBASIC15.07■□□□□ 0
TRIM3O75382 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.07■□□□□ 0
TRIM3O75382 AC073389.1-201ENST00000595595 795 ntBASIC15.07■□□□□ 0
TRIM3O75382 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.07■□□□□ 0
TRIM3O75382 LINC00628-201ENST00000628516 1289 ntBASIC15.07■□□□□ 0
TRIM3O75382 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TRIM3O75382 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.07■□□□□ 0
TRIM3O75382 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRIM3O75382 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRIM3O75382 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM3O75382 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.06■□□□□ 0
TRIM3O75382 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.06■□□□□ 0
TRIM3O75382 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.06■□□□□ 0
TRIM3O75382 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.06■□□□□ 0
TRIM3O75382 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.06■□□□□ 0
TRIM3O75382 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRIM3O75382 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 AL031731.1-201ENST00000642131 2094 ntBASIC15.06■□□□□ 0
TRIM3O75382 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TRIM3O75382 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM3O75382 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.06■□□□□ 0
TRIM3O75382 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms