Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDH16O75309 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDH16O75309 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH16O75309 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.31■□□□□ 0.2
CDH16O75309 MIR4515-201ENST00000584082 81 ntBASIC16.31■□□□□ 0.2
CDH16O75309 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH16O75309 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 AC092127.1-201ENST00000567093 3455 ntBASIC16.31■□□□□ 0.2
CDH16O75309 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDH16O75309 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDH16O75309 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDH16O75309 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDH16O75309 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDH16O75309 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDH16O75309 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH16O75309 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH16O75309 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH16O75309 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH16O75309 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH16O75309 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDH16O75309 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDH16O75309 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDH16O75309 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH16O75309 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH16O75309 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH16O75309 AP001282.1-201ENST00000531301 1499 ntBASIC16.3■□□□□ 0.2
CDH16O75309 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH16O75309 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH16O75309 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH16O75309 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH16O75309 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.3■□□□□ 0.2
CDH16O75309 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH16O75309 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH16O75309 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH16O75309 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH16O75309 PMS2P4-201ENST00000412466 1052 ntBASIC16.3■□□□□ 0.2
CDH16O75309 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDH16O75309 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDH16O75309 FOSL1P1-201ENST00000511041 816 ntBASIC16.3■□□□□ 0.2
CDH16O75309 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH16O75309 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH16O75309 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CDH16O75309 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH16O75309 AC008608.2-201ENST00000606089 416 ntBASIC16.3■□□□□ 0.2
CDH16O75309 AL031055.1-201ENST00000606362 631 ntBASIC16.3■□□□□ 0.2
CDH16O75309 AC008667.4-201ENST00000607370 168 ntBASIC16.3■□□□□ 0.2
CDH16O75309 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH16O75309 AC107918.4-202ENST00000641623 219 ntBASIC16.3■□□□□ 0.2
CDH16O75309 C18orf15-201ENST00000623680 2534 ntBASIC16.3■□□□□ 0.2
CDH16O75309 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDH16O75309 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH16O75309 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH16O75309 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH16O75309 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDH16O75309 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH16O75309 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH16O75309 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH16O75309 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDH16O75309 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH16O75309 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH16O75309 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH16O75309 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH16O75309 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CDH16O75309 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH16O75309 KRT18P27-201ENST00000427733 1299 ntBASIC16.29■□□□□ 0.2
CDH16O75309 DUSP5P1-201ENST00000441325 1139 ntBASIC16.29■□□□□ 0.2
CDH16O75309 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH16O75309 KRT18P31-201ENST00000506277 1292 ntBASIC16.29■□□□□ 0.2
CDH16O75309 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH16O75309 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH16O75309 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH16O75309 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms