Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMAD6O43541 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.19■□□□□ 0.18
SMAD6O43541 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMAD6O43541 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMAD6O43541 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SMAD6O43541 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMAD6O43541 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.19■□□□□ 0.18
SMAD6O43541 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMAD6O43541 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.19■□□□□ 0.18
SMAD6O43541 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SMAD6O43541 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMAD6O43541 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMAD6O43541 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.18■□□□□ 0.18
SMAD6O43541 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.18■□□□□ 0.18
SMAD6O43541 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.18■□□□□ 0.18
SMAD6O43541 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.18■□□□□ 0.18
SMAD6O43541 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SMAD6O43541 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SMAD6O43541 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SMAD6O43541 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 PHKG1P2-201ENST00000457537 863 ntBASIC16.18■□□□□ 0.18
SMAD6O43541 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.18■□□□□ 0.18
SMAD6O43541 SRD5A3P1-201ENST00000603021 949 ntBASIC16.18■□□□□ 0.18
SMAD6O43541 AC004233.3-201ENST00000607794 1269 ntBASIC16.18■□□□□ 0.18
SMAD6O43541 AC069224.1-201ENST00000566372 1715 ntBASIC16.18■□□□□ 0.18
SMAD6O43541 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.18■□□□□ 0.18
SMAD6O43541 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SMAD6O43541 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SMAD6O43541 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SMAD6O43541 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SMAD6O43541 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.18■□□□□ 0.18
SMAD6O43541 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.18■□□□□ 0.18
SMAD6O43541 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SMAD6O43541 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD6O43541 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SMAD6O43541 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SMAD6O43541 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.17■□□□□ 0.18
SMAD6O43541 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.17■□□□□ 0.18
SMAD6O43541 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.17■□□□□ 0.18
SMAD6O43541 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
SMAD6O43541 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
SMAD6O43541 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
SMAD6O43541 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 SPDYE19P-201ENST00000338590 713 ntBASIC16.17■□□□□ 0.18
SMAD6O43541 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 AC074338.1-201ENST00000416825 156 ntBASIC16.17■□□□□ 0.18
SMAD6O43541 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.17■□□□□ 0.18
SMAD6O43541 COX20P2-201ENST00000452636 358 ntBASIC16.17■□□□□ 0.18
SMAD6O43541 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.17■□□□□ 0.18
SMAD6O43541 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.17■□□□□ 0.18
SMAD6O43541 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.17■□□□□ 0.18
SMAD6O43541 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.17■□□□□ 0.18
SMAD6O43541 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.17■□□□□ 0.18
SMAD6O43541 LINC01115-203ENST00000606068 577 ntBASIC16.17■□□□□ 0.18
SMAD6O43541 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 AC024909.3-201ENST00000611513 2257 ntBASIC16.17■□□□□ 0.18
SMAD6O43541 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.17■□□□□ 0.18
SMAD6O43541 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD6O43541 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.17■□□□□ 0.18
SMAD6O43541 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
SMAD6O43541 CDC14C-201ENST00000428251 1719 ntBASIC16.16■□□□□ 0.18
SMAD6O43541 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD6O43541 AC010491.1-201ENST00000563101 2797 ntBASIC16.16■□□□□ 0.18
SMAD6O43541 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD6O43541 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.16■□□□□ 0.18
SMAD6O43541 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD6O43541 Z97205.2-201ENST00000564697 1639 ntBASIC16.16■□□□□ 0.18
SMAD6O43541 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD6O43541 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMAD6O43541 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms