Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRIM38O00635 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.24■□□□□ 0.19
TRIM38O00635 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRIM38O00635 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM38O00635 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRIM38O00635 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM38O00635 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRIM38O00635 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRIM38O00635 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM38O00635 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM38O00635 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.24■□□□□ 0.19
TRIM38O00635 AC241585.1-201ENST00000433527 519 ntBASIC16.24■□□□□ 0.19
TRIM38O00635 AC004890.2-204ENST00000481968 304 ntBASIC16.24■□□□□ 0.19
TRIM38O00635 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM38O00635 MIR4492-201ENST00000581627 80 ntBASIC16.24■□□□□ 0.19
TRIM38O00635 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRIM38O00635 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM38O00635 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRIM38O00635 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM38O00635 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM38O00635 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM38O00635 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM38O00635 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRIM38O00635 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM38O00635 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM38O00635 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM38O00635 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 AC068418.2-201ENST00000577309 3703 ntBASIC16.23■□□□□ 0.19
TRIM38O00635 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM38O00635 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM38O00635 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRIM38O00635 AC027369.6-201ENST00000525520 931 ntBASIC16.23■□□□□ 0.19
TRIM38O00635 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM38O00635 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 AC018529.1-201ENST00000613063 361 ntBASIC16.23■□□□□ 0.19
TRIM38O00635 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM38O00635 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM38O00635 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRIM38O00635 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRIM38O00635 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM38O00635 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 AL021920.2-201ENST00000624828 1351 ntBASIC16.23■□□□□ 0.19
TRIM38O00635 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM38O00635 LINC00895-201ENST00000629028 1637 ntBASIC16.23■□□□□ 0.19
TRIM38O00635 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM38O00635 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM38O00635 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM38O00635 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM38O00635 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM38O00635 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM38O00635 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM38O00635 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
TRIM38O00635 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM38O00635 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM38O00635 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM38O00635 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM38O00635 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.22■□□□□ 0.19
TRIM38O00635 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TRIM38O00635 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM38O00635 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM38O00635 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM38O00635 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM38O00635 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM38O00635 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms