Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 AL139400.1-201ENST00000366220 510 ntBASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 HAUS4P1-201ENST00000406739 1145 ntBASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 PMS2P2-201ENST00000425039 1128 ntBASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 KLF2P3-201ENST00000451977 1087 ntBASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 AC109322.1-201ENST00000524499 1264 ntBASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 AP001282.1-201ENST00000531301 1499 ntBASIC11.7□□□□□ -0.54
SMIM9A6NGZ8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 AL118508.1-201ENST00000613502 2345 ntBASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 AC004987.2-201ENST00000395959 1148 ntBASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 AC140878.1-201ENST00000565277 250 ntBASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 MIR4453-201ENST00000584019 89 ntBASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 Z92544.3-201ENST00000624747 417 ntBASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM9A6NGZ8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms